RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CREG2Q8IUH2 290 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 ZNF283Q8N7M2 679 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 CLPTM1LQ96KA5 538 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 SAMD11Q96NU1 681 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 OR1F2PQ96R84 312 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 RAD9AQ99638 391 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 SLC5A7Q9GZV3 580 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 DPEP3Q9H4B8 488 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 ARL8BQ9NVJ2 186 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 GMEB1Q9Y692 573 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 HAS3O00219 553 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 ADAMTS3O15072 1205 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 DUX1O43812 170 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 KCNJ13O60928 360 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 SCGB1D2O95969 90 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 HLA-EP13747 358 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 ITIH1P19827 911 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 MATN1P21941 496 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 ZNF84P51523 738 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 LIMK2P53671 638 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 UBE2NP61088 152 aaKnown RBP7.02□□□□□ -1.29
UPF2-203ENST00000397053 RAB43Q86YS6 212 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 MTMR14Q8NCE2 650 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 LPGAT1Q92604 370 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 GFM1Q96RP9 751 aaKnown RBP7.02□□□□□ -1.29
UPF2-203ENST00000397053 CCDC28BQ9BUN5 200 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 GPR174Q9BXC1 333 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 WDR12Q9GZL7 423 aaKnown RBP7.02□□□□□ -1.29
UPF2-203ENST00000397053 ABCD2Q9UBJ2 740 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 CYTH4Q9UIA0 394 aa7.02□□□□□ -1.29
UPF2-203ENST00000397053 LAMC1P11047 1609 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ZSCAN5BA6NJL1 495 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 MPPED1O15442 326 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PAK4O96013 591 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 OAS1P00973 400 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PRPS1L1P21108 318 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 SLC6A4P31645 630 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 VIPR1P32241 457 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PIK3CBP42338 1070 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 GJA8P48165 433 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 IDNKQ5T6J7 187 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PAMR1Q6UXH9 720 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 NAPRTQ6XQN6 538 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 USP53Q70EK8 1073 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 SSX6Q7RTT6 188 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ALYREFQ86V81 257 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 PYROXD2Q8N2H3 581 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PQLC1Q8N2U9 271 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 CCDC107Q8WV48 283 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ANKRD7Q92527 254 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ZNF347Q96SE7 839 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 POLR2J2Q9GZM3 115 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 DHX33Q9H6R0 707 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 IL21RQ9HBE5 538 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 UTS2RQ9UKP6 389 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 RPH3AQ9Y2J0 694 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 HCN4Q9Y3Q4 1203 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 BCL9O00512 1426 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 DPPA5A6NC42 116 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 OR2AT4A6NND4 320 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 MATN2O00339 956 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 TGFB1I1O43294 461 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 SHBGP04278 402 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 JUNP05412 331 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 RFC2P35250 354 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 RAB28P51157 221 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 GALK2Q01415 458 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 C1orf61Q13536 156 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 DSG2Q14126 1118 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 GRHL2Q6ISB3 625 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 SLC30A8Q8IWU4 369 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 PHF12Q96QT6 1004 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 C17orf62Q9BQA9 187 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 TMEM175Q9BSA9 504 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 HINT2Q9BX68 163 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 FAM124BQ9H5Z6 455 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 CCDC59Q9P031 241 aaKnown RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 KCNN3Q9UGI6 736 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 FBXW11Q9UKB1 542 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 NRXN1Q9ULB1 1477 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 NCANO14594 1321 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 A0A1W2PPM1 405 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ADH1BP00325 375 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 LMO2P25791 158 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 TM4SF1P30408 202 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 BMP8BP34820 402 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 GGT2P36268 569 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 TAS2R39P59534 338 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 SCGB2B2Q4G0G5 96 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 NIPAL1Q6NVV3 410 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 BMP8AQ7Z5Y6 402 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 MFSD2AQ8NA29 543 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 THAP3Q8WTV1 239 aaPredicted RBP7.01□□□□□ -1.29
UPF2-203ENST00000397053 FOXJ1Q92949 421 aa7.01□□□□□ -1.29
UPF2-203ENST00000397053 ART4Q93070 314 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms