RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MED27Q6P2C8 311 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 REPS1Q96D71 796 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 PELI2Q9HAT8 420 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 GEMIN8Q9NWZ8 242 aaKnown RBP19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 SPHK1Q9NYA1 384 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 GIMAP2Q9UG22 337 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 BTN3A3O00478 584 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 UBDO15205 165 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PRICKLE3O43900 615 aaPredicted RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PEX11AO75192 247 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 KIAA0754O94854 1291 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PEBP1P30086 187 aaKnown RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 RXRGP48443 463 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 NEK2P51955 445 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 MAZP56270 477 aaKnown RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 MEF2AQ02078 507 aaPredicted RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PRDX1Q06830 199 aaKnown RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 BNIP3Q12983 259 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 ATP6AP1LQ52LC2 224 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 Q6ZSR9 355 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 TMEM26Q6ZUK4 368 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 TRIM46Q7Z4K8 759 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 RABEPKQ7Z6M1 372 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 ADGRF3Q8IZF5 1079 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 MARK4Q96L34 752 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PRM3Q9NNZ6 103 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CUEDC1Q9NWM3 386 aaPredicted RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CSNK1G3Q9Y6M4 447 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PIPSLA2A3N6 862 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 NOBOXO60393 691 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CCNDBP1O95273 360 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 PCNAP12004 261 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CCR8P51685 355 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 BIRC2Q13490 618 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 NR6A1Q15406 480 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 SF1Q15637 639 aaKnown RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 GALNTL6Q49A17 601 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 KRT78Q8N1N4 520 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 ARL14Q8N4G2 192 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CEP76Q8TAP6 659 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 WDR20Q8TBZ3 569 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 SLC22A18Q96BI1 424 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 CCDC106Q9BWC9 280 aa19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 MRPS30Q9NP92 439 aaKnown RBP19.67■□□□□ 0.74
VCPKMT-202ENST00000395860 FAM221BA6H8Z2 402 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 PRR35P0CG20 571 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 FASLGP48023 281 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 ABATP80404 500 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 ZNF33BQ06732 778 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 GRIK2Q13002 908 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 DDX39BQ13838 428 aaKnown RBP19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 LPAL2Q16609 132 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 CHSY3Q70JA7 882 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 ZNF761Q86XN6 746 aaPredicted RBP19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 ABHD11Q8NFV4 315 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 OR7G3Q8NG95 312 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 OR10G6Q8NH81 332 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 UBE2E3Q969T4 207 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 AIF1LQ9BQI0 150 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 SPNS1Q9H2V7 528 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 FSCN3Q9NQT6 498 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 HEATR5BQ9P2D3 2071 aa19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 SNRNP200O75643 2136 aaKnown RBP19.66■□□□□ 0.74
VCPKMT-202ENST00000395860 OR6C74A6NCV1 312 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 H7BY64 318 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 TNFRSF10AO00220 468 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CXCR2P25025 360 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CMPK1P30085 196 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 HMGCS1Q01581 520 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 KIR2DS3Q14952 304 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 SHBQ15464 509 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 FAM91A1Q658Y4 838 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 OGFOD3Q6PK18 319 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 FAM129CQ86XR2 697 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 OR2L3Q8NG85 312 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 PPP3R2Q96LZ3 170 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 PRAP1Q96NZ9 151 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CCL27Q9Y4X3 112 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CACNA1EQ15878 2313 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 SERTM1A2A2V5 107 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 LSM1O15116 133 aaKnown RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 POLR2CP19387 275 aaPredicted RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CSTF3Q12996 717 aaKnown RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 ZNF423Q2M1K9 1284 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 AP5B1Q2VPB7 878 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 C6orf136Q5SQH8 315 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 OGFOD2Q6N063 350 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 SPATA19Q7Z5L4 167 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 ADCK2Q7Z695 626 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 YTHDF3Q7Z739 585 aaKnown RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 FAM20CQ8IXL6 584 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 LAS2Q8IYD9 372 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 SLC25A45Q8N413 288 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 FNDC5Q8NAU1 212 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 MTERF1Q99551 399 aaKnown RBP19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 ACPTQ9BZG2 426 aa19.65■□□□□ 0.74
VCPKMT-202ENST00000395860 USP34Q70CQ2 3546 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 A0A1B0GTQ1 180 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 GSAPA4D1B5 854 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms