RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CCL27Q9Y4X3 112 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 GFRA2O00451 464 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ZW10O43264 779 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 MED26O95402 600 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CSF2P04141 144 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ITPKAP23677 461 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 SLC6A4P31645 630 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 PPP3CCP48454 512 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TAF1AQ15573 450 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CAPN13Q6MZZ7 669 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 PRSS48Q7RTY5 328 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 SNX20Q7Z614 316 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 DENND1CQ8IV53 801 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ADGRG2Q8IZP9 1017 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 APIPQ96GX9 242 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 OR5M11Q96RB7 305 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CITED4Q96RK1 184 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TRIB3Q96RU7 358 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CLPBQ9H078 707 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CLMPQ9H6B4 373 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TIGARQ9NQ88 270 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 SERHLQ9NQF3 203 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 EVPLLA8MZ36 301 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ANKRD66B4E2M5 251 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 MANBAO00462 879 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 KLK8O60259 260 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 FHP07954 510 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ITGAMP11215 1152 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TACR2P21452 398 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ACVR2AP27037 513 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 HOXD9P28356 352 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 LSRQ86X29 649 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 GTPBP3Q969Y2 492 aaKnown RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 FEVQ99581 238 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 PKMYT1Q99640 499 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TMEM246Q9BRR3 403 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 SP140LQ9H930 580 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 DYTNA2CJ06 578 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 F5H5T6 163 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 CLIC1O00299 241 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 HOXC11O43248 304 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 RETP07949 1114 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ZFP69Q49AA0 526 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TRIM48Q8IWZ4 208 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 MMP27Q9H306 513 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ELOVL6Q9H5J4 265 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 IL1RAPQ9NPH3 570 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 FBXL12Q9NXK8 326 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 NDRG4Q9ULP0 352 aaKnown RBP13.9□□□□□ -0.18
CLIP2-203ENST00000395060 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
CLIP2-203ENST00000395060 M0QX08 132 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 JUNDP17535 347 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 CXCR2P25025 360 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 CTGFP29279 349 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 TSTQ16762 297 aaKnown RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 PARP15Q460N3 678 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 SERPINA9Q86WD7 417 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 SLC44A2Q8IWA5 706 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 UBASH3BQ8TF42 649 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 KCNJ9Q92806 393 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 EID2BQ96D98 161 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 TRNT1Q96Q11 434 aaKnown RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 CNPPD1Q9BV87 410 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 ASB8Q9H765 288 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 RHCGQ9UBD6 479 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 PCDHGB1Q9Y5G3 927 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 FPGTO14772 594 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 KIAA0513O60268 411 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 PRAMEF1O95521 474 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 EPB42P16452 691 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 NRIP1P48552 1158 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 NKX3-2P78367 333 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 ST3GAL4Q11206 333 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 IRF3Q14653 427 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 GGHQ92820 318 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 C1QTNF3Q9BXJ4 246 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 ATG10Q9H0Y0 220 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 SAMD4AQ9UPU9 718 aaKnown RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 BTBD3Q9Y2F9 522 aa13.89□□□□□ -0.19
CLIP2-203ENST00000395060 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
CLIP2-203ENST00000395060 WASH4PA8MWX3 477 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 CKMT1AP12532 417 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 FPR1P21462 350 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 CD83Q01151 205 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 ZNF181Q2M3W8 571 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 LRRC73Q5JTD7 316 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms