RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 H7BY64 318 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ERVH48-1M5A8F1 160 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 HAT1O14929 419 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC16A5O15375 505 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 P2RX6O15547 441 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CNOT3O75175 753 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CREG1O75629 220 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 C1QL1O75973 258 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 WISP3O95389 354 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ACSL3O95573 720 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 KLK3P07288 261 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 RHOXF2BP0C7M4 288 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 NCF1P14598 390 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ALAS2P22557 587 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PTPN4P29074 926 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 STX2P32856 288 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 GP5P40197 560 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 GCGRP47871 477 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR1D4P47884 311 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ARF3P61204 181 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 MEF2AQ02078 507 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRDX1Q06830 199 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CHAF1BQ13112 559 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ARHGAP19Q14CB8 494 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 TSNQ15631 228 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 UAP1Q16222 522 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PPP1R3AQ16821 1122 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 HKDC1Q2TB90 917 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 FBXO48Q5FWF7 155 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 MLIPQ5VWP3 458 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF425Q6IV72 752 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRRC8EQ6NSJ5 796 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 RHBDD2Q6NTF9 364 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 FBXO42Q6P3S6 717 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF517Q6ZMY9 492 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 RNF44Q7L0R7 432 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PAQR7Q86WK9 346 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 UHMK1Q8TAS1 419 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 MCOLN3Q8TDD5 553 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 EXT2Q93063 718 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CCDC138Q96M89 665 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRFN5Q96NI6 719 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRAP1Q96NZ9 151 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 GBP5Q96PP8 586 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR4K3Q96R72 315 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPR22Q99680 433 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CPNE1Q99829 537 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZFYVE21Q9BQ24 234 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 MACROD1Q9BQ69 325 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 RHOXF2Q9BQY4 288 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 ARHGAP9Q9BRR9 750 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 NDC1Q9BTX1 674 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 PHACTR1Q9C0D0 580 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CHRNA10Q9GZZ6 450 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 CDC42EP4Q9H3Q1 356 aaKnown RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC22A11Q9NSA0 550 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 TXLNGQ9NUQ3 528 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAU2Q9Y6X3 613 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 BOD1L1Q8NFC6 3051 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 AHCTF1Q8WYP5 2266 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 FEZF1A0PJY2 475 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 PABPN1LA6NDY0 278 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF839A8K0R7 811 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TARM1B6A8C7 271 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 C21orf140B9A014 251 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 MASP2O00187 686 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 FFAR3O14843 346 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 GPR42O15529 346 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 DNAJB5O75953 348 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TUBB4AP04350 444 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 GSTA2P09210 222 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 HIST1H2AGP0C0S8 130 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCDC166P0CW27 439 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CDH1P12830 882 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 HIST1H2ADP20671 130 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 AGXTP21549 392 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 HSD17B2P37059 387 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC12A2P55011 1212 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 POLE2P56282 527 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 RPS15P62841 145 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 IRF9Q00978 393 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 POU4F1Q01851 419 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 NCF4Q15080 339 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR4D1Q15615 310 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 COLEC12Q5KU26 742 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 WASHC2DQ5SRD0 308 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 GRTP1Q5TC63 336 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CPZQ66K79 652 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TLDC1Q6P9B6 456 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 BORAQ6PGQ7 559 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SHISA6Q6ZSJ9 500 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 COX15Q7KZN9 410 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SHISA5Q8N114 240 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CSNK1A1LQ8N752 337 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CEP112Q8N8E3 955 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TTC29Q8NA56 475 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZUFSPQ96AP4 578 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms