RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PDZK1IP1Q13113 114 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 MAPRE2Q15555 327 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PLEKHN1Q494U1 663 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 PTPN20Q4JDL3 420 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CDONQ4KMG0 1287 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LYPLAL1Q5VWZ2 237 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TP53INP2Q8IXH6 220 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ZNF595Q8IYB9 648 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ARL14Q8N4G2 192 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 KBTBD3Q8NAB2 608 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ABHD11Q8NFV4 315 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SLC2A14Q8TDB8 520 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LIN37Q96GY3 246 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 CYTH2Q99418 400 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LLPHQ9BRT6 129 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 S1PR5Q9H228 398 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CRNNQ9UBG3 495 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 TTC7AQ9ULT0 858 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 ICKQ9UPZ9 632 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 A0A1B0GUA9 196 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ANKUB1A6NFN9 424 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 HCRTR2O43614 444 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TRIM13O60858 407 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PSIP1O75475 530 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 CLN5O75503 358 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SYNGR4O95473 234 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LDLRP01130 860 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ERBB2P04626 1255 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FDXRP22570 491 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PTPN6P29350 595 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RGS7P49802 495 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CLCNKAP51800 687 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TUBA1BP68363 451 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RABL3Q5HYI8 236 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TTC23LQ6PF05 361 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TUBA1AQ71U36 451 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DCUN1D3Q8IWE4 304 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 HORMAD2Q8N7B1 307 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LMNTD1Q8N9Z9 388 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 L3MBTL4Q8NA19 623 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ATP6V1C2Q8NEY4 427 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CLHC1Q8NHS4 586 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SHKBP1Q8TBC3 707 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ISG20Q96AZ6 181 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 SPAG8Q99932 426 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 CLSTN3Q9BQT9 956 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 MSTO1Q9BUK6 570 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ZNF350Q9GZX5 532 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 GSX1Q9H4S2 264 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 PDZD7Q9H5P4 517 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SLC2A4RGQ9NR83 387 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ATPIF1Q9UII2 106 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FZD10Q9ULW2 581 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.43□□□□□ -1.86
XRN1-202ENST00000392981 VWA7Q9Y334 891 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DNAH12Q6ZR08 3092 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FAM149AA5PLN7 773 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DRGXA6NNA5 263 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CHUKO15111 745 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ANGPT2O15123 496 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RNF113AO15541 343 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 FLRT2O43155 660 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 GRAP2O75791 330 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FUT4P22083 530 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 GLDCP23378 1020 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 EIF2S3P41091 472 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 MNDAP41218 407 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RAG2P55895 527 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FOXL2P58012 376 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PIP5KL1Q5T9C9 394 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 QSOX2Q6ZRP7 698 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 HTR3DQ70Z44 454 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CXXC5Q7LFL8 322 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 ZNF551Q7Z340 670 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 OR5T3Q8NGG3 340 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ACMSDQ8TDX5 336 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TANKQ92844 425 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TMEM186Q96B77 213 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TRNT1Q96Q11 434 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 BEX2Q9BXY8 128 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RGCCQ9H4X1 137 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SPACA1Q9HBV2 294 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PDGFCQ9NRA1 345 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PLA2G2EQ9NZK7 142 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 OAS3Q9Y6K5 1087 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 PLEKHG2Q9H7P9 1386 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 A0A096LPK6 155 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TMEM247A6NEH6 219 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RSPH10B2B2RC85 870 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TPST2O60704 377 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 GLRA3O75311 464 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 OR4F21O95013 312 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TJP3O95049 919 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RSPH10BP0C881 870 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SNRPBP14678 240 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 FPR3P25089 353 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms