RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CDC16Q13042 620 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 PDK4Q16654 411 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 FIGLAQ6QHK4 219 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 C17orf64Q86WR6 236 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 C19orf47Q8N9M1 422 aaKnown RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 RDH11Q8TC12 318 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 ZUFSPQ96AP4 578 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 PRAP1Q96NZ9 151 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 FAM60AQ9NP50 221 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 OXSMQ9NWU1 459 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 KCNE2Q9Y6J6 123 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 PTPRBP23467 1997 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 TMEM120BA0PK00 339 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PMS2P1A4D2B8 440 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 E7EQ34 232 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 TM9SF1O15321 606 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 HCRTR1O43613 425 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 EBLN1P0CF75 366 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 FOLR1P15328 257 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 GNAZP19086 355 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 IMPDH1P20839 514 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CSTF2P33240 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMN1-202ENST00000380707 HERVK_113P63132 956 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 FOXC1Q12948 553 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PCLAFQ15004 111 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CATSPEREQ5SY80 951 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ZNF425Q6IV72 752 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 LRRC70Q7Z2Q7 622 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PAQR7Q86WK9 346 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 D2HGDHQ8N465 521 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 AGBL5Q8NDL9 886 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ABHD11Q8NFV4 315 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 GRAMD1AQ96CP6 724 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 TCTN2Q96GX1 697 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 PKNOX2Q96KN3 472 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 NSUN5Q96P11 429 aaKnown RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 TMEM237Q96Q45 408 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 MECRQ9BV79 373 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 C1QTNF3Q9BXJ4 246 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ERVK-6Q9BXR3 956 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ACBD3Q9H3P7 528 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PDE7BQ9NP56 450 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 OCIAD1Q9NX40 245 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SOHLH2Q9NX45 425 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PCTPQ9UKL6 214 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SNX7Q9UNH6 387 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 WASF3Q9UPY6 502 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 BTRCQ9Y297 605 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 DYRK1BQ9Y463 629 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CTSVO60911 334 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ZWINTO95229 277 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 RPS17P08708 135 aaKnown RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 CCL4P13236 92 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 HGFP14210 728 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 EPB42P16452 691 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 ARL4DP49703 201 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 MEF2AQ02078 507 aaPredicted RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 GTF2H2Q13888 395 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 UNC50Q53HI1 259 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 GTF2H2CQ6P1K8 395 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 METTL2BQ6P1Q9 378 aaKnown RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 FBXO42Q6P3S6 717 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 NXPE4Q6UWF7 544 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SLCO4C1Q6ZQN7 724 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 RAB11FIP2Q7L804 512 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 GOLGA7Q7Z5G4 137 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 OR4K1Q8NGD4 311 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 L3HYPDHQ96EM0 354 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 FCRL4Q96PJ5 515 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CMKLR1Q99788 373 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 CHRNA10Q9GZZ6 450 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 SIDT1Q9NXL6 827 aaKnown RBP12.16□□□□□ -0.46
SMN1-202ENST00000380707 GPRC5BQ9NZH0 403 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
SMN1-202ENST00000380707 NCOR2Q9Y618 2525 aa12.15□□□□□ -0.46
SMN1-202ENST00000380707 CFAP47Q6ZTR5 3102 aa12.15□□□□□ -0.46
SMN1-202ENST00000380707 DMXL2Q8TDJ6 3036 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms