RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ASMTP46597 345 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 BDKRB1P46663 353 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PREPP48147 710 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CHRNB3Q05901 458 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 FCHO2Q0JRZ9 810 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MTAPQ13126 283 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ADAM15Q13444 863 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DOC2AQ14183 400 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SELPLGQ14242 412 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NRF1Q16656 503 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 LIN52Q52LA3 116 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 C6orf52Q5T4I8 152 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PRAMEF9Q5VWM5 478 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NOXRED1Q6NXP6 359 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 UNC5DQ6UXZ4 953 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 GET4Q7L5D6 327 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 GPR180Q86V85 440 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RALGPS2Q86X27 583 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CARM1Q86X55 608 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RIMKLAQ8IXN7 391 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 YAF2Q8IY57 180 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DTWD1Q8N5C7 304 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 KRTCAP2Q8N6L1 136 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF548Q8NEK5 533 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NELL1Q92832 810 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ATOH1Q92858 354 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 WDR34Q96EX3 536 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 APIPQ96GX9 242 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MSLNLQ96KJ4 702 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 APOLD1Q96LR9 279 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC29A1Q99808 456 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 TRIM8Q9BZR9 551 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PAIP1Q9H074 479 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 EHD1Q9H4M9 534 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PNPLA3Q9NST1 481 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 UBAP1Q9NZ09 502 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CLEC1BQ9P126 229 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DYRK1BQ9Y463 629 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MYO15AQ9UKN7 3530 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 KLHL33A6NCF5 533 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 TBC1D3BA6NDS4 549 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SAC3D1A6NKF1 404 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 E7EQ34 232 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NPC1O15118 1278 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DEAF1O75398 565 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 C1orf105O95561 183 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RETP07949 1114 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PABPC4LP0CB38 370 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 HOXB9P17482 250 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CKMT2P17540 419 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PBLDP30039 288 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 OPRD1P41143 372 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 KIR3DL1P43629 444 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NEK2P51955 445 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ACSM2AQ08AH3 577 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ABHD18Q0P651 414 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 LRRC74AQ0VAA2 488 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RPA4Q13156 261 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 LAPTM5Q13571 262 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RUNX3Q13761 415 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SPIN4Q56A73 249 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NHSL2Q5HYW2 709 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PAGE2BQ5JRK9 111 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ACSM2BQ68CK6 577 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ADAMTSL4Q6UY14 1074 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CALHM3Q86XJ0 350 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 TRAPPC5Q8IUR0 188 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SYT12Q8IV01 421 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MSRB3Q8IXL7 192 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MICU2Q8IYU8 434 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 OR2L2Q8NH16 312 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 MED8Q96G25 268 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 HIC2Q96JB3 615 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ZFYVE19Q96K21 471 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CPPED1Q9BRF8 314 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 HAUS8Q9BT25 410 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 EFCAB11Q9BUY7 163 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 OR2AG1Q9H205 316 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SGK2Q9HBY8 427 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 OLAHQ9NV23 265 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SIRT5Q9NXA8 310 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC25A37Q9NYZ2 338 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM8A1Q9UBU6 413 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF639Q9UID6 485 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 CDH7Q9ULB5 785 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 COQ6Q9Y2Z9 468 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DNMT3AQ9Y6K1 912 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RNF103-CHMP3A0A140T963 221 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 MGAT4DA6NG13 374 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SOCS2O14508 198 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 MMP20O60882 483 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 PRSS23O95084 383 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC16A8O95907 504 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CD22P20273 847 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 TEAD1P28347 426 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms