RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TRIT1Q9H3H1 467 aaKnown RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PITPNM1O00562 1244 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 RCAN2Q14206 197 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PON2Q15165 354 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 TBRG1Q3YBR2 411 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ARMC6Q6NXE6 501 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 SH2D5Q6ZV89 423 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 UXS1Q8NBZ7 420 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PPP1R13LQ8WUF5 828 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 MAELQ96JY0 434 aaKnown RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 TRIM8Q9BZR9 551 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 POLR2J3Q9H1A7 115 aaKnown RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 COMMD9Q9P000 198 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 INTS6Q9UL03 887 aaKnown RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PADI3Q9ULW8 664 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 HCN4Q9Y3Q4 1203 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 NT5C1B-RDH14C9J2C7 533 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 REM1O75628 298 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 EOMESO95936 686 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 OXTRP30559 389 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 DSTNP60981 165 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 MACC1Q6ZN28 852 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 TPGS1Q6ZTW0 290 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 IZUMO1Q8IYV9 350 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 MEIOBQ8N635 442 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 GRIN3AQ8TCU5 1115 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF486Q96H40 463 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ALPK1Q96QP1 1244 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PTGDR2Q9Y5Y4 395 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 SPIN1Q9Y657 262 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 AP1M2Q9Y6Q5 423 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PSIP1O75475 530 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 POU2F1P14859 743 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ACSL1P33121 698 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PRKAG1P54619 331 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 FBXW4P57775 412 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PITX1P78337 314 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CYP4F8P98187 520 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CDK5R2Q13319 367 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TBC1D25Q3MII6 688 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PKDCCQ504Y2 493 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MFSD4BQ5TF39 518 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF691Q5VV52 312 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 OR13F1Q8NGS4 319 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NDNFQ8TB73 568 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 C11orf24Q96F05 449 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CAMK1GQ96NX5 476 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MGAT4BQ9UQ53 548 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SLC45A1Q9Y2W3 748 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RNF11Q9Y3C5 154 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SPEF1Q9Y4P9 236 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 EDN1P05305 212 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CRHBPP24387 322 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RCVRNP35243 200 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PPP3R1P63098 170 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RPP38P78345 283 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 VMACQ2NL98 169 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NHSL2Q5HYW2 709 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MEDAGQ5VYS4 303 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CCBE1Q6UXH8 406 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 C17orf64Q86WR6 236 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CCDC28AQ8IWP9 274 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TRIM48Q8IWZ4 208 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 LSMEM2Q8N112 164 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF614Q8N883 585 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SETD6Q8TBK2 473 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ATG10Q9H0Y0 220 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TPT1P8Q9HAU6 139 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TVP23BQ9NYZ1 205 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NCKAP1Q9Y2A7 1128 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 EXOSC1Q9Y3B2 195 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SH3D21A4FU49 640 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ANKRD66B4E2M5 251 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PDPK1O15530 556 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ENTPD6O75354 484 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GABBR2O75899 941 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SERPINA3P01011 423 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CD247P20963 164 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CSTF2P33240 577 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ACVRL1P37023 503 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GPR1P46091 355 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CD83Q01151 205 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CD47Q08722 323 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NPRL3Q12980 569 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RANBP10Q6VN20 620 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 OR8H3Q8N146 312 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 OR6Q1Q8NGQ2 317 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CYP2S1Q96SQ9 504 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms