RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SPIN4Q56A73 249 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ZNF805Q5CZA5 627 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TCEAL5Q5H9L2 206 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ACSM2BQ68CK6 577 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ANKRD54Q6NXT1 300 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 KCTD8Q6ZWB6 473 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CXorf40BQ96DE9 158 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ZSWIM3Q96MP5 696 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TSSK3Q96PN8 268 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CCM2Q9BSQ5 444 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TBCDQ9BTW9 1192 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 EPHX3Q9H6B9 360 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 POLR1BQ9H9Y6 1135 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 NTN4Q9HB63 628 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 SLC25A37Q9NYZ2 338 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 USP22Q9UPT9 525 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 SLC22A14Q9Y267 594 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 H0YIV9 168 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 FPGTO14772 594 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ABCB7O75027 752 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PSIP1O75475 530 aaKnown RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 SERPINA1P01009 418 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 MT-ND1P03886 318 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PCNAP12004 261 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 COX7A2P14406 83 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 EPORP19235 508 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 DCKP27707 260 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TMBIM6P55061 237 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PHEXP78562 749 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 HYAL1Q12794 435 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CBX2Q14781 532 aaPredicted RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 HENMT1Q5T8I9 393 aaKnown RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 NEK5Q6P3R8 708 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 DHRS4L2Q6PKH6 230 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 GET4Q7L5D6 327 aaPredicted RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 KIAA0907Q7Z7F0 614 aaPredicted RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 THOC6Q86W42 341 aaKnown RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 MSRB3Q8IXL7 192 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ARL10Q8N8L6 244 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 OR2A12Q8NGT7 310 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CLHC1Q8NHS4 586 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PANX1Q96RD7 426 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 TOR3AQ9H497 397 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ZNF576Q9H609 170 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 FAM118AQ9NWS6 357 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ETAA1Q9NY74 926 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 LMCD1Q9NZU5 365 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 NEUROG3Q9Y4Z2 214 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 HSPE1-MOB4S4R3N1 261 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CROCCQ5TZA2 2017 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 BPTFQ12830 3046 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PLXNA2O75051 1894 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 UPK1AO00322 258 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CPNE6O95741 557 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 ELFN1P0C7U0 828 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 DDX5P17844 614 aaKnown RBP11.85□□□□□ -0.51
UBR4-203ENST00000375225 ITPKAP23677 461 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PRLHRP49683 370 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PFN3P60673 137 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PPP2R2BQ00005 443 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 GRSF1Q12849 480 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBR4-203ENST00000375225 GTF2H3Q13889 308 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
UBR4-203ENST00000375225 ZIK1Q3SY52 487 aaPredicted RBP11.85□□□□□ -0.51
UBR4-203ENST00000375225 PAGE2BQ5JRK9 111 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CPZQ66K79 652 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 HIST2H2AA3Q6FI13 130 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CES5AQ6NT32 575 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 SHQ1Q6PI26 577 aaKnown RBP11.85□□□□□ -0.51
UBR4-203ENST00000375225 DOK6Q6PKX4 331 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 SPESP1Q6UW49 350 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 ENPP6Q6UWR7 440 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 ZDHHC21Q8IVQ6 265 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CHST14Q8NCH0 376 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 SMARCD2Q92925 531 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 GLYATL1Q969I3 302 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 MUS81Q96NY9 551 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 DOK1Q99704 481 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 P2RY13Q9BPV8 354 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 GABARAPL1Q9H0R8 117 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 ADNPQ9H2P0 1102 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PLGRKTQ9HBL7 147 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 PCDH12Q9NPG4 1184 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 OBP2AQ9NY56 170 aa11.85□□□□□ -0.51
UBR4-203ENST00000375225 CD84Q9UIB8 345 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms