RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PLA2G10O15496 165 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GJB1P08034 283 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 RPS17P08708 135 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 HMGCLP35914 325 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 KIAA0040Q15053 153 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 AANATQ16613 207 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 CLVS2Q5SYC1 327 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF549Q6P9A3 640 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 RANBP10Q6VN20 620 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ATCAYQ86WG3 371 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 PHACTR4Q8IZ21 702 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 STX19Q8N4C7 294 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GPR137Q96N19 417 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ASPNQ9BXN1 380 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TRIM45Q9H8W5 580 aaPredicted RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF490Q9ULM2 529 aaPredicted RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TNPO3Q9Y5L0 923 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 MYLKQ15746 1914 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 SHROOM3Q8TF72 1996 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 GPX5O75715 221 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 FHP07954 510 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 AIF1P55008 147 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ALDH6A1Q02252 535 aaKnown RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ADIGQ0VDE8 80 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 BAMBIQ13145 260 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 VEPH1Q14D04 833 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ANGPT1Q15389 498 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 TSTQ16762 297 aaKnown RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 C10orf62Q5T681 223 aaPredicted RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 COMMD7Q86VX2 200 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 LINC00518Q8N0U6 118 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 CD99L2Q8TCZ2 262 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MARC2Q969Z3 335 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 NTAN1Q96AB6 310 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 AP2M1Q96CW1 435 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF419Q96HQ0 510 aaPredicted RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 PAK6Q9NQU5 681 aaPredicted RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 IKZF3Q9UKT9 509 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 WASHC1A8K0Z3 465 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ATG13O75143 517 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 RFPL3O75679 317 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 IQCF3P0C7M6 154 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 RORCP51449 518 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 NUDT6P53370 316 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 SCAPQ12770 1279 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 KCNC3Q14003 757 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 KCTD2Q14681 263 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 RBBP7Q16576 425 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 PDZK1Q5T2W1 519 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF367Q7RTV3 350 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 C16orf62Q7Z3J2 963 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 ZSWIM9Q86XI8 627 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 EFHBQ8N7U6 833 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 GDPD1Q8N9F7 314 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MRGPRX2Q96LB1 330 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 CNPPD1Q9BV87 410 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 IL1RAPQ9NPH3 570 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 C1orf109Q9NX04 203 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 CMAHPQ9Y471 501 aa12.55□□□□□ -0.4
PRPF4-201ENST00000374198 MYL12BO14950 172 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 KERAO60938 352 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 DIRAS1O95057 198 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MYL12AP19105 171 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MAPKAPK3Q16644 382 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 HKDC1Q2TB90 917 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 FAHD1Q6P587 224 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 KDELC1Q6UW63 502 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 GPALPP1Q8IXQ4 340 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MGLLQ99685 303 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 PPIL3Q9H2H8 161 aaKnown RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 CATSPERBQ9H7T0 1116 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 SIRT5Q9NXA8 310 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 RNF112Q9ULX5 631 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 DIMT1Q9UNQ2 313 aaKnown RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 SLC45A1Q9Y2W3 748 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MLYCDO95822 493 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 AKT1P31749 480 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 RRAS2P62070 204 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms