RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CKBP12277 381 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ELNP15502 786 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PTPN6P29350 595 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 SGSHP51688 502 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 RPS14P62263 151 aaKnown RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 RACK1P63244 317 aaKnown RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PTRHD1Q6GMV3 140 aaKnown RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 LINGO4Q6UY18 593 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 IL17RDQ8NFM7 739 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 LKAAEAR1Q8TD35 194 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 TP53INP1Q96A56 240 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 SIGLEC11Q96RL6 698 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 YME1L1Q96TA2 773 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 KCNH6Q9H252 994 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ERVK13-1Q9NX77 482 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 EHD3Q9NZN3 535 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PPT2Q9UMR5 302 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ERVW-1Q9UQF0 538 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 TMA7Q9Y2S6 64 aaKnown RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PCDHGB6Q9Y5F9 930 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 RAI2Q9Y5P3 530 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 GBF1Q92538 1859 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PDZK1P1A8MUH7 402 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 SLC28A1O00337 649 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 RFXANKO14593 260 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 GJB5O95377 273 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PRAMEF12O95522 483 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ESR1P03372 595 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 COL6A1P12109 1028 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 NXNL2Q5VZ03 156 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PDE12Q6L8Q7 609 aaKnown RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 IPCEF1Q8WWN9 437 aaPredicted RBP14.38□□□□□ -0.11
COL9A2-202ENST00000372748 HSH2DQ96JZ2 352 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 DMRTB1Q96MA1 342 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 TTPALQ9BTX7 342 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ACPTQ9BZG2 426 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 ANKHQ9HCJ1 492 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 FBXL12Q9NXK8 326 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 GPR83Q9NYM4 423 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 DHRS7Q9Y394 339 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PCDHGA6Q9Y5G7 932 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 PLXNA3P51805 1871 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 M0R129 80 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 MANBAO00462 879 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 GLUD1P00367 558 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 CA5AP35218 305 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 MAGEA11P43364 429 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 PRKCZQ05513 592 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 TUBA3EQ6PEY2 450 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 PSKH2Q96QS6 385 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 CEP44Q9C0F1 390 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 ROGDIQ9GZN7 287 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 NUAK2Q9H093 628 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 RNF38Q9H0F5 515 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 REEP1Q9H902 201 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 TAS2R16Q9NYV7 291 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 TBC1D14Q9P2M4 693 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 ANKRD66B4E2M5 251 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 WNT9AO14904 365 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 RGS13O14921 159 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 MED26O95402 600 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 AQP1P29972 269 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 PTGER3P43115 390 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 IDH2P48735 452 aaKnown RBP14.37□□□□□ -0.11
COL9A2-202ENST00000372748 ZNF45Q02386 682 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 LRIF1Q5T3J3 769 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 AGAP6Q5VW22 663 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 TMC5Q6UXY8 1006 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 TCAIMQ8N3R3 496 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 AGAP4Q96P64 663 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
COL9A2-202ENST00000372748 KCNS3Q9BQ31 491 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 ZNF221Q9UK13 617 aa14.37□□□□□ -0.11
COL9A2-202ENST00000372748 LINC00854A0A1B0GVQ3 168 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 ACSL4O60488 711 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 EOMESO95936 686 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 RPLP0P05388 317 aaKnown RBP14.36□□□□□ -0.11
COL9A2-202ENST00000372748 STSP08842 583 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 IRF1P10914 325 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 BMP1P13497 986 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 IL1RNP18510 177 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 UGT2B10P36537 528 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 CLCN4P51793 760 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 OR2B6P58173 313 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 ARHGEF7Q14155 803 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 RTP2Q5QGT7 225 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 ATAD3CQ5T2N8 411 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-202ENST00000372748 TAS1R1Q7RTX1 841 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 ZNF675Q8TD23 568 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 RAD18Q9NS91 495 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 LAMA2P24043 3122 aaKnown RBP14.36□□□□□ -0.11
COL9A2-202ENST00000372748 CTDSP2O14595 271 aa14.36□□□□□ -0.11
COL9A2-202ENST00000372748 HOXC11O43248 304 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-202ENST00000372748 CYP7B1O75881 506 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms