RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PFKLP17858 780 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 SHMT2P34897 504 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 TXNL4AP83876 142 aaKnown RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 CREMQ03060 361 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 ZNF77Q15935 545 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 TRIM46Q7Z4K8 759 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 ADCK2Q7Z695 626 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 MICU2Q8IYU8 434 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 MMP21Q8N119 569 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 ZNF548Q8NEK5 533 aaPredicted RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 OR52J3Q8NH60 311 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 ANKRD60Q9BZ19 345 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 RIBC2Q9H4K1 309 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 DEC1Q9P2X7 70 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 RFXAPO00287 272 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 CLIC1O00299 241 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 RTCAO00442 366 aaKnown RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 SH3BP5O60239 455 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 PIGAP37287 484 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 CAPGP40121 348 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 CRATP43155 626 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 GRIK2Q13002 908 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 COQ5Q5HYK3 327 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 PDE12Q6L8Q7 609 aaKnown RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 B3GNT6Q6ZMB0 384 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 GPR141Q7Z602 305 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 DPP10Q8N608 796 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 BPIFB6Q8NFQ5 453 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 USP7Q93009 1102 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 LYSMD1Q96S90 227 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 RMND5AQ9H871 391 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 C5AR2Q9P296 337 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 BAG5Q9UL15 447 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 ERVK-11Q9UQG0 969 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 PCYT1BQ9Y5K3 369 aaPredicted RBP11.38□□□□□ -0.59
PDE6C-201ENST00000371447 SNX8Q9Y5X2 465 aa11.38□□□□□ -0.59
PDE6C-201ENST00000371447 LINC01553A4QN01 128 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 NUAK1O60285 661 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 AMD1P17707 334 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 SOAT1P35610 550 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ALDH9A1P49189 494 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 CLCN2P51788 898 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 RPS6KA3P51812 740 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 SEC13P55735 322 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 DUS1LQ6P1R4 473 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ABRAXAS1Q6UWZ7 409 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ZNF551Q7Z340 670 aaPredicted RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 PLA2G15Q8NCC3 412 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 TSPEARQ8WU66 669 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ISG20Q96AZ6 181 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 POP7O75817 140 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 THRBP10828 461 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 AGXTP21549 392 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 MAT2AP31153 395 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 UAP1L1Q3KQV9 507 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 TMEM240Q5SV17 173 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 TMEM26Q6ZUK4 368 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 KCTD8Q6ZWB6 473 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 PTRH1Q86Y79 214 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 CCDC138Q96M89 665 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 PAIP1Q9H074 479 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 RUBCNLQ9H714 662 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 AASDHPPTQ9NRN7 309 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 NEUROG3Q9Y4Z2 214 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 PCDHGA11Q9Y5H2 935 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 TRANK1O15050 2925 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ACPPP15309 386 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 CDH2P19022 906 aaPredicted RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 IMPA1P29218 277 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 CLDN8P56748 225 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 IL5RAQ01344 420 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 PMS2P3Q13401 168 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 SLBPQ14493 270 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 SLC36A3Q495N2 470 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 HENMT1Q5T8I9 393 aaKnown RBP11.37□□□□□ -0.59
PDE6C-201ENST00000371447 LRRC70Q7Z2Q7 622 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 HMGN2P46Q86SG4 172 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ARRDC3Q96B67 414 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 MACROD1Q9BQ69 325 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 CCM2Q9BSQ5 444 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ARMC7Q9H6L4 198 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 RDH14Q9HBH5 336 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 ABCG2Q9UNQ0 655 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 OR1A2Q9Y585 309 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 COMMD3-BMI1R4GMX3 469 aa11.37□□□□□ -0.59
PDE6C-201ENST00000371447 AGAP14A8MT82 685 aa11.36□□□□□ -0.59
PDE6C-201ENST00000371447 HEPACAM2A8MVW5 462 aa11.36□□□□□ -0.59
PDE6C-201ENST00000371447 ARNTLO00327 626 aa11.36□□□□□ -0.59
PDE6C-201ENST00000371447 XPNPEP2O43895 674 aa11.36□□□□□ -0.59
PDE6C-201ENST00000371447 MYO1DO94832 1006 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms