RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 AGPAT4Q9NRZ5 378 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PCDHB5Q9Y5E4 795 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PSAT1Q9Y617 370 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 A0A1W2PRQ8 180 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 PRORSD1PA6NEY8 169 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 POM121CA8CG34 1229 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 FAM86B1E9PN63 330 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SIGLEC6O43699 453 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 GMFGO60234 142 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SDC3O75056 442 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 PTP4A3O75365 173 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 LTA4HP09960 611 aaKnown RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TM4SF1P30408 202 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 L1CAMP32004 1257 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 UGT2B10P36537 528 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 RAB10P61026 200 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TGFB2P61812 414 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ORC1Q13415 861 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SEC23BQ15437 767 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 NTRK2Q16620 822 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 PAPD5Q8NDF8 572 aaKnown RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 RXFP2Q8WXD0 754 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ITGA10O75578 1167 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 FABP3P05413 133 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ZNF250P15622 560 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 HNF1AP20823 631 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 IVDP26440 423 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CDH11P55287 796 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CTAG1AP78358 180 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 NBPF12Q5TAG4 269 aaPredicted RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 LCN8Q6JVE9 175 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TEX261Q6UWH6 196 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 C4orf32Q8N8J7 132 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CHST13Q8NET6 341 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TRMT10AQ8TBZ6 339 aaKnown RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 HSPA12BQ96MM6 686 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 PCDHGB5Q9Y5G0 923 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 U3KQ87 197 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 MROH6A6NGR9 719 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SMLR1H3BR10 107 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ITGA3P26006 1051 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 GRK5P34947 590 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CTBP2P56545 445 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 BACE1P56817 501 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 FPGSQ05932 587 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 RTP2Q5QGT7 225 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 UBXN11Q5T124 520 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 KIAA1614Q5VZ46 1190 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SLC30A6Q6NXT4 461 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 FBXO39Q8N4B4 442 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 OR52N1Q8NH53 320 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 VPS25Q9BRG1 176 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 BEX1Q9HBH7 125 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 OXSMQ9NWU1 459 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SH3BGRL2Q9UJC5 107 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 TRAV19A0A0A6YYK7 116 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CBY3A6NI87 242 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 RFXAPO00287 272 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SYN3O14994 580 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 DARSP14868 501 aaKnown RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 S100A3P33764 101 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SP140Q13342 867 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 GRM7Q14831 915 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ALG11Q2TAA5 492 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ULK3Q6PHR2 472 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 HACD2Q6Y1H2 254 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ZSWIM9Q86XI8 627 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 SLC41A1Q8IVJ1 513 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CERS5Q8N5B7 392 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 OR56A4Q8NGH8 313 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ARL11Q969Q4 196 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 RGCCQ9H4X1 137 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 ZFP14Q9HCL3 533 aa10.16□□□□□ -0.78
PRDM1-201ENST00000369089 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
PRDM1-201ENST00000369089 CIB4A0PJX0 185 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 FAM155AB1AL88 458 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-201ENST00000369089 CTDSP2O14595 271 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 CDH5P33151 784 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-201ENST00000369089 SERPINF1P36955 418 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 EVX2Q03828 476 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 IQCCQ4KMZ1 466 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 TEX44Q53QW1 395 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 IDNKQ5T6J7 187 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 MSANTD2Q6P1R3 559 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 DNAJB7Q7Z6W7 309 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-201ENST00000369089 ACOT11Q8WXI4 607 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-201ENST00000369089 LRFN5Q96NI6 719 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 ACBD6Q9BR61 282 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 CBWD1Q9BRT8 395 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 EMC7Q9NPA0 242 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 LYARQ9NX58 379 aaKnown RBP10.15□□□□□ -0.78
PRDM1-201ENST00000369089 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.78
PRDM1-201ENST00000369089 CXCR6O00574 342 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms