RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PCDHB11Q9Y5F2 797 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PIPSLA2A3N6 862 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 RSL1D1O76021 490 aaKnown RBP23.02■■□□□ 1.28
SNX3-203ENST00000368979 IDO1P14902 403 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 CD1EP15812 388 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 DHPSP49366 369 aaPredicted RBP23.02■■□□□ 1.28
SNX3-203ENST00000368979 EMX2Q04743 252 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 CSTF3Q12996 717 aaKnown RBP23.02■■□□□ 1.28
SNX3-203ENST00000368979 HERC3Q15034 1050 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 ICE2Q659A1 982 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 ASRGL1Q7L266 308 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 SFTPA2Q8IWL1 248 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 TRIM48Q8IWZ4 208 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 FNDC5Q8NAU1 212 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 ABHD11Q8NFV4 315 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 OR7G3Q8NG95 312 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 SLC37A2Q8TED4 501 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 JPH3Q8WXH2 748 aaPredicted RBP23.02■■□□□ 1.28
SNX3-203ENST00000368979 REPS1Q96D71 796 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 CMTM5Q96DZ9 223 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 CUEDC1Q9NWM3 386 aaPredicted RBP23.02■■□□□ 1.28
SNX3-203ENST00000368979 GPR45Q9Y5Y3 372 aa23.02■■□□□ 1.28
SNX3-203ENST00000368979 VIPP01282 170 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 COX4I1P13073 169 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 DIO3P55073 304 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 STX1BP61266 288 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 HNRNPKP61978 463 aaKnown RBP eCLIP23.01■■□□□ 1.27
SNX3-203ENST00000368979 PRDX1Q06830 199 aaKnown RBP23.01■■□□□ 1.27
SNX3-203ENST00000368979 PLK5Q496M5 336 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 RFTN2Q52LD8 501 aaPredicted RBP23.01■■□□□ 1.27
SNX3-203ENST00000368979 C10orf62Q5T681 223 aaPredicted RBP23.01■■□□□ 1.27
SNX3-203ENST00000368979 GKN2Q86XP6 184 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 POU5F2Q8N7G0 328 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 FAM46DQ8NEK8 389 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 LMX1AQ8TE12 382 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 ZDHHC1Q8WTX9 485 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 BRINP2Q9C0B6 783 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 LRMDAQ9H2I8 198 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 LRTM1Q9HBL6 345 aa23.01■■□□□ 1.27
SNX3-203ENST00000368979 SDR39U1Q9NRG7 319 aaPredicted RBP23.01■■□□□ 1.27
SNX3-203ENST00000368979 A0A1B0GTW7 788 aa23■■□□□ 1.27
SNX3-203ENST00000368979 PSMD12O00232 456 aaPredicted RBP23■■□□□ 1.27
SNX3-203ENST00000368979 DNAJC8O75937 253 aaPredicted RBP23■■□□□ 1.27
SNX3-203ENST00000368979 CHRM5P08912 532 aaPredicted RBP23■■□□□ 1.27
SNX3-203ENST00000368979 HSD3B1P14060 373 aa23■■□□□ 1.27
SNX3-203ENST00000368979 GPX3P22352 226 aa23■■□□□ 1.27
SNX3-203ENST00000368979 HSD3B2P26439 372 aa23■■□□□ 1.27
SNX3-203ENST00000368979 CPA2P48052 419 aa23■■□□□ 1.27
SNX3-203ENST00000368979 RASSF2P50749 326 aa23■■□□□ 1.27
SNX3-203ENST00000368979 ACTN3Q08043 901 aaPredicted RBP23■■□□□ 1.27
SNX3-203ENST00000368979 GPR18Q14330 331 aa23■■□□□ 1.27
SNX3-203ENST00000368979 TEAD4Q15561 434 aa23■■□□□ 1.27
SNX3-203ENST00000368979 KIF19Q2TAC6 998 aa23■■□□□ 1.27
SNX3-203ENST00000368979 ZFAND4Q86XD8 727 aa23■■□□□ 1.27
SNX3-203ENST00000368979 RNF175Q8N4F7 328 aa23■■□□□ 1.27
SNX3-203ENST00000368979 ZNF548Q8NEK5 533 aaPredicted RBP23■■□□□ 1.27
SNX3-203ENST00000368979 OR4E2Q8NGC2 313 aa23■■□□□ 1.27
SNX3-203ENST00000368979 OR4K1Q8NGD4 311 aa23■■□□□ 1.27
SNX3-203ENST00000368979 NELL1Q92832 810 aa23■■□□□ 1.27
SNX3-203ENST00000368979 C1orf50Q9BV19 199 aa23■■□□□ 1.27
SNX3-203ENST00000368979 BRF2Q9HAW0 419 aa23■■□□□ 1.27
SNX3-203ENST00000368979 C1orf109Q9NX04 203 aa23■■□□□ 1.27
SNX3-203ENST00000368979 SPHK1Q9NYA1 384 aa23■■□□□ 1.27
SNX3-203ENST00000368979 TSC22D4Q9Y3Q8 395 aa23■■□□□ 1.27
SNX3-203ENST00000368979 MUC3AQ02505 3323 aa23■■□□□ 1.27
SNX3-203ENST00000368979 A0A1B0GVT2 93 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 HRO43593 1189 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 PTPN4P29074 926 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 ACADVLP49748 655 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 RPL38P63173 70 aaKnown RBP22.99■■□□□ 1.27
SNX3-203ENST00000368979 MEF2AQ02078 507 aaPredicted RBP22.99■■□□□ 1.27
SNX3-203ENST00000368979 GRIK2Q13002 908 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 HIST2H2ACQ16777 129 aaPredicted RBP22.99■■□□□ 1.27
SNX3-203ENST00000368979 ZNF423Q2M1K9 1284 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 HIST2H2AA3Q6FI13 130 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 ADNP2Q6IQ32 1131 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 ADGRF3Q8IZF5 1079 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 MIER2Q8N344 545 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 RP9Q8TA86 221 aaKnown RBP22.99■■□□□ 1.27
SNX3-203ENST00000368979 UBE2E3Q969T4 207 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 SRMSQ9H3Y6 488 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 ERVMER34-1Q9H9K5 563 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 ASIC5Q9NY37 505 aa22.99■■□□□ 1.27
SNX3-203ENST00000368979 NOP53Q9NZM5 478 aaKnown RBP22.99■■□□□ 1.27
SNX3-203ENST00000368979 B4DGG1 531 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 BTN3A3O00478 584 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 AQP9O43315 295 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 GPR37L1O60883 481 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 THRAP10827 490 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PCNAP12004 261 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 CCR8P51685 355 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 ABATP80404 500 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 REEP5Q00765 189 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 MAD2L1Q13257 205 aaPredicted RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 KIAA0040Q15053 153 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PLCL1Q15111 1095 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PDCD4Q53EL6 469 aaKnown RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 SLC9B2Q86UD5 537 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 SNX32Q86XE0 403 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 KRT78Q8N1N4 520 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms