RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CARD16Q5EG05 197 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CBLL1Q75N03 491 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ZNF551Q7Z340 670 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 CYP4Z1Q86W10 505 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 RBM12BQ8IXT5 1001 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 KLHDC8AQ8IYD2 350 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CD99L2Q8TCZ2 262 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SKA2Q8WVK7 121 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 S100ZQ8WXG8 99 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 VMP1Q96GC9 406 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 REXO4Q9GZR2 422 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 HMG20AQ9NP66 347 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CORO2BQ9UQ03 480 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 U3KQV3 271 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ANAPC1Q9H1A4 1944 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 MAGEB17A8MXT2 336 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CLDN25C9JDP6 229 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PTGES3LE9PB15 166 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 QSOX1O00391 747 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SCN2BO60939 215 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 INMTO95050 263 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 KCNK5O95279 499 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 FTH1P02794 183 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CKMP06732 381 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ENGP17813 658 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 RXRGP48443 463 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 DAPP51397 102 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ITGA1P56199 1179 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 POLR2LP62875 67 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 CSNK2BP67870 215 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SLC35A2P78381 396 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PPP1R8Q12972 351 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 CHIT1Q13231 466 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 AQP6Q13520 282 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 GTF2H3Q13889 308 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 UGT8Q16880 541 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 B3GNT8Q7Z7M8 397 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 TSPYL5Q86VY4 417 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 HORMAD1Q86X24 394 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CNIH3Q8TBE1 160 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SNRNP27Q8WVK2 155 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 IPCEF1Q8WWN9 437 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 ATL1Q8WXF7 558 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PITX2Q99697 317 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 P2RY13Q9BPV8 354 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CCDC90BQ9GZT6 254 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SPATA6Q9NWH7 488 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 VPS29Q9UBQ0 182 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 NDRG4Q9ULP0 352 aaKnown RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 CLEC4EQ9ULY5 219 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ABCG2Q9UNQ0 655 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SLC22A14Q9Y267 594 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 COQ6Q9Y2Z9 468 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 GMPPBQ9Y5P6 360 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PRAMEF4O60810 478 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 MITFO75030 526 aaPredicted RBP13.85□□□□□ -0.19
CD48-201ENST00000368045 MYO1DO94832 1006 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 LRATO95237 230 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 IMPDH2P12268 514 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 COX7A2P14406 83 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 ZNF30P17039 623 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 HNF4AP41235 474 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 ASMTP46597 345 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 CD97P48960 835 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 WNT3P56703 355 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 DCDC1P59894 354 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 PFN3P60673 137 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 IRF8Q02556 426 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 PIGFQ07326 219 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 LRRC74AQ0VAA2 488 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 NOGQ13253 232 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 SLC14A1Q13336 389 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 NPTX1Q15818 432 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 SYT6Q5T7P8 510 aaPredicted RBP13.85□□□□□ -0.19
CD48-201ENST00000368045 PRAMEF9Q5VWM5 478 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 NIPAL1Q6NVV3 410 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 CEP68Q76N32 757 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 PTOV1Q86YD1 416 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
CD48-201ENST00000368045 ASZ1Q8WWH4 475 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 SCLYQ96I15 445 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 EGLN2Q96KS0 407 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 CFHR5Q9BXR6 569 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 BRD9Q9H8M2 597 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.85□□□□□ -0.19
CD48-201ENST00000368045 RAD18Q9NS91 495 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 BTNL2Q9UIR0 455 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 SLC25A13Q9UJS0 675 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 TMPRSS11EQ9UL52 423 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 SH3GLB1Q9Y371 365 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 PCDHB11Q9Y5F2 797 aa13.85□□□□□ -0.19
CD48-201ENST00000368045 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms