RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PKMP14618 531 aaKnown RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 BCKDHBP21953 392 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 HTR1BP28222 390 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 AKT1P31749 480 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 IDUAP35475 653 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 HPCAL1P37235 193 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ETFBP38117 255 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 YAP1P46937 504 aaKnown RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 SLC6A11P48066 632 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ZNF140P52738 457 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 MLLT10P55197 1068 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TBX4P57082 545 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CSNK2BP67870 215 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 GNA12Q03113 381 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CD47Q08722 323 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ITKQ08881 620 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TAF10Q12962 218 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ITGADQ13349 1161 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 SPCS2Q15005 226 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 DHCR24Q15392 516 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TRIP4Q15650 581 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 C5orf22Q49AR2 442 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 OTUD3Q5T2D3 398 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 TTC23LQ6PF05 361 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 PAQR3Q6TCH7 311 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CYP20A1Q6UW02 462 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TMEM92Q6UXU6 159 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 Q6ZSR9 355 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 LDB1Q86U70 411 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 C11orf74Q86VG3 221 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 SFTPA1Q8IWL2 248 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CPNE9Q8IYJ1 553 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 RYBPQ8N488 228 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 FNDC5Q8NAU1 212 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 MDGA1Q8NFP4 955 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 BPIFB6Q8NFQ5 453 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 OR7A2PQ8NGA2 310 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 OR6Q1Q8NGQ2 317 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 OR2T11Q8NH01 316 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 FBXL8Q96CD0 374 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 YIPF6Q96EC8 236 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 SLC47A1Q96FL8 570 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TEX37Q96LM6 180 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ZNF583Q96ND8 569 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TMEM74Q96NL1 305 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 DACH2Q96NX9 599 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 EDEM2Q9BV94 578 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ADNPQ9H2P0 1102 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 FBXO44Q9H4M3 255 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 PDFQ9HBH1 243 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CPNE5Q9HCH3 593 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 IL37Q9NZH6 218 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 MPP6Q9NZW5 540 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ZNF225Q9UK10 706 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 WASF3Q9UPY6 502 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 UGT2A1Q9Y4X1 527 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 NEUROG3Q9Y4Z2 214 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ORC6Q9Y5N6 252 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 AP1M2Q9Y6Q5 423 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
USF1-201ENST00000368019 ADAMTS9Q9P2N4 1935 aa11.21□□□□□ -0.62
USF1-201ENST00000368019 LOC100130705A0A1B0GUX0 176 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 ELOVL7A1L3X0 281 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 OR51F1A6NGY5 319 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 LRRC14BA6NHZ5 514 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SAGE2PA6NJ88 616 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 H7C0S8 307 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 J3KR12 359 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SLC28A1O00337 649 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 SLC9A3R1O14745 358 aaPredicted RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 DPM1O60762 260 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 RAMP2O60895 175 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 NDUFS3O75489 264 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 PRKD3O94806 890 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SERPINF2P08697 491 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 HOXD12P35452 270 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 EIF2DP41214 584 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 MAGEA2P43356 314 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 KIR2DL1P43626 348 aaPredicted RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 TTPAP49638 278 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 GP2P55259 537 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 SEC13P55735 322 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 YBX1P67809 324 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 RING1Q06587 406 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 CYP4F3Q08477 520 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 KCNAB2Q13303 367 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 IHHQ14623 411 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 CYP2A13Q16696 494 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 NDUFA5Q16718 116 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 FUT11Q495W5 492 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MS4A13Q5J8X5 152 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SLC2A7Q6PXP3 512 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MSANTD1Q6ZTZ1 278 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 ADAMTSL2Q86TH1 951 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms