RNA–Protein interactions for RNA: ENST00000367576.5

LTV1-201, Transcript of LTV1 ribosome biogenesis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTV1, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTV1-201ENST00000367576 PCBD2Q9H0N5 130 aa17.13■□□□□ 0.33
LTV1-201ENST00000367576 GEMIN8Q9NWZ8 242 aaKnown RBP17.13■□□□□ 0.33
LTV1-201ENST00000367576 OR6C2Q9NZP2 312 aa17.13■□□□□ 0.33
LTV1-201ENST00000367576 ARHGEF17Q96PE2 2063 aaPredicted RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 PIPSLA2A3N6 862 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 H7BY64 318 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 PPM1DO15297 605 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 UGDHO60701 494 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 MYF5P13349 255 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 TYRP1P17643 537 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 EPHA8P29322 1005 aaPredicted RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 HNF4AP41235 474 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 NR6A1Q15406 480 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 SF1Q15637 639 aaKnown RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 FRG2Q64ET8 278 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 CLNKQ7Z7G1 428 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 USP7Q93009 1102 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 PRAP1Q96NZ9 151 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 FRG2BQ96QU4 278 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 MTERF1Q99551 399 aaKnown RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 SLC6A20Q9NP91 592 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 KNL1Q8NG31 2342 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 PRICKLE3O43900 615 aaPredicted RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 UBOX5O94941 541 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 TBCCQ15814 346 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 MED27Q6P2C8 311 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
LTV1-201ENST00000367576 PLD3Q8IV08 490 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 MAGEB10Q96LZ2 347 aaPredicted RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 EFCAB11Q9BUY7 163 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 ACPTQ9BZG2 426 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 MRPS30Q9NP92 439 aaKnown RBP17.12■□□□□ 0.33
LTV1-201ENST00000367576 SAR1AQ9NR31 198 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 RIC8BQ9NVN3 520 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 GMEB2Q9UKD1 530 aa17.12■□□□□ 0.33
LTV1-201ENST00000367576 IGKV1-8A0A0C4DH67 115 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 CCDC22O60826 627 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 SERPINA6P08185 405 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 CASP2P42575 452 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
LTV1-201ENST00000367576 CCR8P51685 355 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 PRDX1Q06830 199 aaKnown RBP17.11■□□□□ 0.33
LTV1-201ENST00000367576 PCDH1Q08174 1060 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 ZNF423Q2M1K9 1284 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 C14orf28Q4W4Y0 310 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.11■□□□□ 0.33
LTV1-201ENST00000367576 Q6ZSR9 355 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 OR2L3Q8NG85 312 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 OR7G3Q8NG95 312 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 WDR34Q96EX3 536 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 ARRDC1-AS1Q9H2J1 176 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 PELI2Q9HAT8 420 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 CAPN10Q9HC96 672 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 ACTR10Q9NZ32 417 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 TRIM33Q9UPN9 1127 aa17.11■□□□□ 0.33
LTV1-201ENST00000367576 GIMD1P0DJR0 217 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 UGT2B7P16662 529 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 LBPP18428 481 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 HOXD12P35452 270 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 RXRGP48443 463 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 PPP1CAP62136 330 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 RBBP5Q15291 538 aaKnown RBP17.1■□□□□ 0.33
LTV1-201ENST00000367576 PAGE2BQ5JRK9 111 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 C6orf132Q5T0Z8 1188 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 KIAA1614Q5VZ46 1190 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 TCEAL6Q6IPX3 200 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 WDR20Q8TBZ3 569 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 TCEAL3Q969E4 200 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 SLC45A3Q96JT2 553 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 PPM1MQ96MI6 270 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 GTPBP2Q9BX10 602 aaKnown RBP17.1■□□□□ 0.33
LTV1-201ENST00000367576 COL25A1Q9BXS0 654 aaPredicted RBP17.1■□□□□ 0.33
LTV1-201ENST00000367576 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 EHD1Q9H4M9 534 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 PFDN4Q9NQP4 134 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 SLC6A14Q9UN76 642 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 H0YIV9 168 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 SLC28A1O00337 649 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 UBDO15205 165 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 RGS14O43566 566 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 ALDOCP09972 364 aaKnown RBP17.1■□□□□ 0.33
LTV1-201ENST00000367576 CMPK1P30085 196 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 MPLP40238 635 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 CYP4F2P78329 520 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 E2F2Q14209 437 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 HIST2H2ACQ16777 129 aaPredicted RBP17.1■□□□□ 0.33
LTV1-201ENST00000367576 SPRED3Q2MJR0 410 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 HIST2H2AA3Q6FI13 130 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 OGFOD3Q6PK18 319 aa17.1■□□□□ 0.33
LTV1-201ENST00000367576 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms