RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 EZRP15311 586 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 GNSP15586 552 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 PKLRP30613 574 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 DPP6P42658 865 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 NR6A1Q15406 480 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 CPSF6Q16630 551 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 IMPG1Q17R60 797 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ATP6AP1LQ52LC2 224 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 SCIMPQ6UWF3 145 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 CEP68Q76N32 757 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 SPATA19Q7Z5L4 167 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 TREML1Q86YW5 311 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 GPBAR1Q8TDU6 330 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 USP7Q93009 1102 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 MARK4Q96L34 752 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ELOVL6Q9H5J4 265 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 KIR3DX1Q9H7L2 352 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 TMEM131Q92545 1883 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 A6NCN8 305 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 OR52A4PA6NMU1 304 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 TLR4O00206 839 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 PRAMEF4O60810 478 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 WFS1O76024 890 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 WNT1P04628 370 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SPINK2P20155 84 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 MAOBP27338 520 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 PIK3R1P27986 724 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 RAB28P51157 221 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 C21orf59P57076 290 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 LAPTM5Q13571 262 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 DOC2AQ14183 400 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 FASTKQ14296 549 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 NAA25Q14CX7 972 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 HERC3Q15034 1050 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 TCEA2Q15560 299 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 CSRP2Q16527 193 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 PLK5Q496M5 336 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 PRAMEF9Q5VWM5 478 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SUSD1Q6UWL2 747 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SLCO4C1Q6ZQN7 724 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 ARMCX6Q7L4S7 300 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 OR2L8Q8NGY9 312 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 OR2T11Q8NH01 316 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 CCL4L1Q8NHW4 92 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC5A11Q8WWX8 675 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SH3KBP1Q96B97 665 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 REPS1Q96D71 796 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 WDR34Q96EX3 536 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 PTCD3Q96EY7 689 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 ZC3H10Q96K80 434 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 MENTQ9BUN1 341 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 EFCAB11Q9BUY7 163 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 APOBEC3BQ9UH17 382 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 SLCO1B1Q9Y6L6 691 aa13.37□□□□□ -0.27
PDLIM5-203ENST00000359265 HEATR5BQ9P2D3 2071 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 A0A1B0GTW7 788 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 OR5K4A6NMS3 321 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 VILLO15195 856 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 DNAJC8O75937 253 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 RETP07949 1114 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 IDO1P14902 403 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 NPPBP16860 134 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 JUNDP17535 347 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SHMT2P34897 504 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 CASP2P42575 452 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 ERVK-8P63133 956 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 CSTF3Q12996 717 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 MAD2L1Q13257 205 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 E2F2Q14209 437 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 MAPRE2Q15555 327 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 GSTA3Q16772 222 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 KIF19Q2TAC6 998 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SMU1Q2TAY7 513 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SGO1Q5FBB7 561 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 PAGE2BQ5JRK9 111 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 C10orf62Q5T681 223 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 ATG9BQ674R7 924 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 LAIR1Q6GTX8 287 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 TRIM46Q7Z4K8 759 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 C17orf64Q86WR6 236 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 NRROSQ86YC3 692 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms