RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 IGLV3-25P01717 112 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 HTR1AP08908 422 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ANXA4P09525 319 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 NUDT7P0C024 238 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OR56A5P0C7T3 313 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CKMT1AP12532 417 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 JUNBP17275 347 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 HOXC13P31276 330 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CYP4F8P98187 520 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ST3GAL4Q11206 333 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 KCNA10Q16322 511 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CTF1Q16619 201 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TYSND1Q2T9J0 566 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 FAM214AQ32MH5 1076 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DGKKQ5KSL6 1271 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PDZK1Q5T2W1 519 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CPTPQ5TA50 214 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TRIM48Q8IWZ4 208 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 LGI4Q8N135 537 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TCAIMQ8N3R3 496 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 C7orf57Q8NEG2 295 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OR10G2Q8NGC3 310 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SLC38A4Q969I6 547 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SLC39A13Q96H72 371 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 UROC1Q96N76 676 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 FEVQ99581 238 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ACAT2Q9BWD1 397 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ELOVL2Q9NXB9 296 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 KLHL3Q9UH77 587 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TMED5Q9Y3A6 229 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 A0A1B0GVM2 712 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ARNTLO00327 626 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ZW10O43264 779 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SOX14O95416 240 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 GSTM1P09488 218 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 EPORP19235 508 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CYP2A7P20853 494 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CLK3P49761 638 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CSRP3P50461 194 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SGSHP51688 502 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 IFITM3Q01628 133 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ACOX1Q15067 660 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 STEAP3Q658P3 488 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CPZQ66K79 652 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 THOC7Q6I9Y2 204 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 RETSATQ6NUM9 610 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CERS6Q6ZMG9 384 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SLC16A12Q6ZSM3 486 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SIX5Q8N196 739 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 PAPD5Q8NDF8 572 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF675Q8TD23 568 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 DOK1Q99704 481 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 RNF38Q9H0F5 515 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TP63Q9H3D4 680 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ACTL8Q9H568 366 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 GORASP2Q9H8Y8 452 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TPT1P8Q9HAU6 139 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TM9SF3Q9HD45 589 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 NECTIN3Q9NQS3 549 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TEKT2Q9UIF3 430 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TMCC3Q9ULS5 477 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 NEU3Q9UQ49 428 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SLC38A8A6NNN8 435 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TPD52L2O43399 206 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 APOL3O95236 402 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 HOXD9P28356 352 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CSKP41240 450 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CDC42P60953 191 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MAD2L1BPQ15013 274 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 VMACQ2NL98 169 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ATG9BQ674R7 924 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 GTF2IRD2BQ6EKJ0 949 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 USP43Q70EL4 1123 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TSPAN33Q86UF1 283 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 GTF2IRD2Q86UP8 949 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 FAM9CQ8IZT9 166 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TTYH2Q9BSA4 534 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ACPTQ9BZG2 426 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 KCNH6Q9H252 994 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SGK2Q9HBY8 427 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SPATA7Q9P0W8 599 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ERVK-11Q9UQG0 969 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 AP3M1Q9Y2T2 418 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MTMR11A4FU01 709 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ARHGEF9O43307 516 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 AP2A2O94973 939 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 PRPS2P11908 318 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TNNI3P19429 210 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 LIPAP38571 399 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 HNF4AP41235 474 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MASP1P48740 699 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 FCGRTP55899 365 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 CD83Q01151 205 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 NOXRED1Q6NXP6 359 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SBSNQ6UWP8 590 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 FAM131AQ6UXB0 335 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 USP50Q70EL3 339 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms