RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 OR4K1Q8NGD4 311 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LMX1AQ8TE12 382 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ZDHHC1Q8WTX9 485 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GIMAP2Q9UG22 337 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SUSD2Q9UGT4 822 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PCDHB11Q9Y5F2 797 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CAPN7Q9Y6W3 813 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 KNL1Q8NG31 2342 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TTC28Q96AY4 2481 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 A0A1B0GVT2 93 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 YY2O15391 372 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 AQP9O43315 295 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PIAS2O75928 621 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 CDH1P12830 882 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 CALB2P22676 271 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PRPH2P23942 346 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PSMB5P28074 263 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PEBP1P30086 187 aaKnown RBP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ATP4BP51164 291 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 NEK2P51955 445 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ERVK-8P63133 956 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 YBX1P67809 324 aaKnown RBP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 CSTF3Q12996 717 aaKnown RBP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 KLF10Q13118 480 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SLBPQ14493 270 aaKnown RBP eCLIP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SQLEQ14534 574 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 NR6A1Q15406 480 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SGO1Q5FBB7 561 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PEAR1Q5VY43 1037 aaPredicted RBP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 MED27Q6P2C8 311 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SPATA19Q7Z5L4 167 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SLC9B2Q86UD5 537 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SFTPA2Q8IWL1 248 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ADGRF3Q8IZF5 1079 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 AVL9Q8NBF6 648 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ZBTB44Q8NCP5 570 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 OR4E2Q8NGC2 313 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 REPS1Q96D71 796 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 MTFMTQ96DP5 389 aaKnown RBP9.26□□□□□ -0.93
NPHP1-202ENST00000355301 NSL1Q96IY1 281 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 MARK4Q96L34 752 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PPP3R2Q96LZ3 170 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ACPTQ9BZG2 426 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 SRMSQ9H3Y6 488 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PELI2Q9HAT8 420 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 BRF2Q9HAW0 419 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 ARL8BQ9NVJ2 186 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 TSC22D4Q9Y3Q8 395 aa9.26□□□□□ -0.93
NPHP1-202ENST00000355301 PIPSLA2A3N6 862 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 FAM221BA6H8Z2 402 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HNRNPCL1O60812 293 aaKnown RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 RSL1D1O76021 490 aaKnown RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 CHRM5P08912 532 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HSD3B1P14060 373 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 IDO1P14902 403 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 CXCR2P25025 360 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HSD3B2P26439 372 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 AVPR2P30518 371 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HOXD12P35452 270 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 SCTRP47872 440 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 FASLGP48023 281 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 MRPL19P49406 292 aaKnown RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 CCR8P51685 355 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 ABATP80404 500 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HMGCS1Q01581 520 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HHEXQ03014 270 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 EMX2Q04743 252 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 GRIK2Q13002 908 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 NAA25Q14CX7 972 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 PLCL1Q15111 1095 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 GSTA3Q16772 222 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HIST2H2ACQ16777 129 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 IMPG1Q17R60 797 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 KIF19Q2TAC6 998 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 AP5B1Q2VPB7 878 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HIST2H2AA3Q6FI13 130 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 SYT12Q8IV01 421 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 FNDC5Q8NAU1 212 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 HUS1BQ8NHY5 278 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 UBE2E3Q969T4 207 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 SLC22A18Q96BI1 424 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 CMTM5Q96DZ9 223 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 PITHD1Q9GZP4 211 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 SDR39U1Q9NRG7 319 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 CUEDC1Q9NWM3 386 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 ZSCAN32Q9NX65 697 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 SPHK1Q9NYA1 384 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 G3BP2Q9UN86 482 aaKnown RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 IGKV1-8A0A0C4DH67 115 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 B4DGG1 531 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 FOXE1O00358 373 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-202ENST00000355301 BTN3A3O00478 584 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 PIK3R1P27986 724 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 PRDX6P30041 224 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 RXRGP48443 463 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 ACADVLP49748 655 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 DIO3P55073 304 aa9.25□□□□□ -0.93
NPHP1-202ENST00000355301 BNC1Q01954 994 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms