RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF689Q96CS4 500 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 LRRC58Q96CX6 371 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 OR2M4Q96R27 311 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 REXO4Q9GZR2 422 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 STON1Q9Y6Q2 735 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 BTN3A3O00478 584 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 B3GALT2O43825 422 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 AGR2O95994 175 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 C6P13671 934 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 VIPR2P41587 438 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 C5orf22Q49AR2 442 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 FGD3Q5JSP0 725 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 EIF3MQ7L2H7 374 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 RBM12BQ8IXT5 1001 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 PACRGLQ8N7B6 248 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF366Q8N895 744 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 HMGB4Q8WW32 186 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 HPS1Q92902 700 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 WDR92Q96MX6 357 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 HMG20AQ9NP66 347 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 IRAK3Q9Y616 596 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 A0A1W2PRG6 482 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GABBR2O75899 941 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 MAT2AP31153 395 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ERVFC1P60507 584 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 NTHL1P78549 312 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 KANK2Q63ZY3 851 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 SLC9B2Q86UD5 537 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 OXR1Q8N573 874 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ZBTB8BQ8NAP8 495 aaPredicted RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CLHC1Q8NHS4 586 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 NXPE3Q969Y0 559 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ESAMQ96AP7 390 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 FBXL8Q96CD0 374 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RBM4Q9BWF3 364 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CCNB1IP1Q9NPC3 277 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ACSS2Q9NR19 701 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 HCFC1R1Q9NWW0 138 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CACNA2D2Q9NY47 1150 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 FAM20BO75063 409 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 UGT2B11O75310 529 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CYP17A1P05093 508 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GPAT3Q53EU6 434 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF544Q6NX49 715 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ZFAND4Q86XD8 727 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GOLM1Q8NBJ4 401 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 OTULINQ96BN8 352 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 NSMCE3Q96MG7 304 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 HPS4Q9NQG7 708 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CITO14578 2027 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RHPN2P1A8MT19 583 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CENPXA8MT69 81 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 H3BNC9 293 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 AP3D1O14617 1153 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 SLC28A2O43868 658 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RNGTTO60942 597 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 TNFRSF4P43489 277 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 COPZ1P61923 177 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 C9orf64Q5T6V5 341 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 PPP4R4Q6NUP7 873 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GAREM2Q75VX8 874 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF605Q86T29 641 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 OR13J1Q8NGT2 312 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ADAMTS15Q8TE58 950 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 METTL2AQ96IZ6 378 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RIBC2Q9H4K1 309 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 IL26Q9NPH9 171 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 MRPL39Q9NYK5 338 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CIDEBQ9UHD4 219 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RGS5O15539 181 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 MTX2O75431 263 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 BDKRB1P46663 353 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ARCN1P48444 511 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 KHKP50053 298 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CLCN2P51788 898 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CDKL1Q00532 357 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 PDK3Q15120 406 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 EML3Q32P44 896 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 ABHD13Q7L211 337 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 PHF10Q8WUB8 498 aaKnown RBP11.82□□□□□ -0.52
SMAD9-201ENST00000350148 CGREF1Q99674 301 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 LINC00597Q9H2U6 94 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 RHBGQ9H310 441 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 EGFL7Q9UHF1 273 aa11.82□□□□□ -0.52
SMAD9-201ENST00000350148 GFRA2O00451 464 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CACNG3O60359 315 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 JUPP14923 745 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SOX6P35712 828 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 PRKAG1P54619 331 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CYP4F2P78329 520 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms