RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 OPN1SWP03999 348 aa17.32■□□□□ 0.36
APP-202ENST00000348990 PTPN2P17706 415 aa17.32■□□□□ 0.36
APP-202ENST00000348990 PAX3P23760 479 aa17.32■□□□□ 0.36
APP-202ENST00000348990 FADDQ13158 208 aa17.32■□□□□ 0.36
APP-202ENST00000348990 TBRG1Q3YBR2 411 aa17.32■□□□□ 0.36
APP-202ENST00000348990 SBSNQ6UWP8 590 aa17.32■□□□□ 0.36
APP-202ENST00000348990 ZNF598Q86UK7 904 aaKnown RBP17.32■□□□□ 0.36
APP-202ENST00000348990 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
APP-202ENST00000348990 FCGR1BQ92637 280 aa17.32■□□□□ 0.36
APP-202ENST00000348990 SLC39A13Q96H72 371 aa17.32■□□□□ 0.36
APP-202ENST00000348990 CNPPD1Q9BV87 410 aa17.32■□□□□ 0.36
APP-202ENST00000348990 TAS2R9Q9NYW1 312 aa17.32■□□□□ 0.36
APP-202ENST00000348990 FAM172BPA6NC97 362 aa17.32■□□□□ 0.36
APP-202ENST00000348990 ANKRD66B4E2M5 251 aa17.32■□□□□ 0.36
APP-202ENST00000348990 TACR2P21452 398 aa17.32■□□□□ 0.36
APP-202ENST00000348990 CD52P31358 61 aa17.32■□□□□ 0.36
APP-202ENST00000348990 SLC19A1P41440 591 aa17.32■□□□□ 0.36
APP-202ENST00000348990 KIR3DL1P43629 444 aa17.32■□□□□ 0.36
APP-202ENST00000348990 ZNF517Q6ZMY9 492 aaPredicted RBP17.32■□□□□ 0.36
APP-202ENST00000348990 PLSCR3Q9NRY6 295 aa17.32■□□□□ 0.36
APP-202ENST00000348990 TMEM45AQ9NWC5 275 aa17.32■□□□□ 0.36
APP-202ENST00000348990 ARL15Q9NXU5 204 aa17.32■□□□□ 0.36
APP-202ENST00000348990 SPASTQ9UBP0 616 aa17.32■□□□□ 0.36
APP-202ENST00000348990 DHRS7Q9Y394 339 aa17.32■□□□□ 0.36
APP-202ENST00000348990 ZNF236Q9UL36 1845 aa17.32■□□□□ 0.36
APP-202ENST00000348990 PDCD11Q14690 1871 aaKnown RBP17.31■□□□□ 0.36
APP-202ENST00000348990 AREL1O15033 823 aa17.31■□□□□ 0.36
APP-202ENST00000348990 HOXC11O43248 304 aaPredicted RBP17.31■□□□□ 0.36
APP-202ENST00000348990 CA5AP35218 305 aa17.31■□□□□ 0.36
APP-202ENST00000348990 MRPS6P82932 125 aaKnown RBP17.31■□□□□ 0.36
APP-202ENST00000348990 SMARCB1Q12824 385 aa17.31■□□□□ 0.36
APP-202ENST00000348990 TSTQ16762 297 aaKnown RBP17.31■□□□□ 0.36
APP-202ENST00000348990 CYP27C1Q4G0S4 372 aa17.31■□□□□ 0.36
APP-202ENST00000348990 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
APP-202ENST00000348990 RAB43Q86YS6 212 aa17.31■□□□□ 0.36
APP-202ENST00000348990 SPATA17Q96L03 361 aa17.31■□□□□ 0.36
APP-202ENST00000348990 FEVQ99581 238 aa17.31■□□□□ 0.36
APP-202ENST00000348990 ASB8Q9H765 288 aa17.31■□□□□ 0.36
APP-202ENST00000348990 TIGARQ9NQ88 270 aa17.31■□□□□ 0.36
APP-202ENST00000348990 RPRD1BQ9NQG5 326 aaKnown RBP17.31■□□□□ 0.36
APP-202ENST00000348990 PTHP01270 115 aa17.31■□□□□ 0.36
APP-202ENST00000348990 ALPIP09923 528 aa17.31■□□□□ 0.36
APP-202ENST00000348990 ZNF7P17097 686 aaPredicted RBP17.31■□□□□ 0.36
APP-202ENST00000348990 CYP4Z2PQ8N1L4 340 aa17.31■□□□□ 0.36
APP-202ENST00000348990 IL17RDQ8NFM7 739 aa17.31■□□□□ 0.36
APP-202ENST00000348990 LYVE1Q9Y5Y7 322 aa17.31■□□□□ 0.36
APP-202ENST00000348990 WNT9AO14904 365 aa17.31■□□□□ 0.36
APP-202ENST00000348990 TAPBPO15533 448 aa17.31■□□□□ 0.36
APP-202ENST00000348990 STK16O75716 305 aa17.31■□□□□ 0.36
APP-202ENST00000348990 PDYNP01213 254 aa17.31■□□□□ 0.36
APP-202ENST00000348990 CHRM5P08912 532 aaPredicted RBP17.31■□□□□ 0.36
APP-202ENST00000348990 ACVR2AP27037 513 aa17.31■□□□□ 0.36
APP-202ENST00000348990 OR1G1P47890 313 aa17.31■□□□□ 0.36
APP-202ENST00000348990 SEMG2Q02383 582 aa17.31■□□□□ 0.36
APP-202ENST00000348990 VMACQ2NL98 169 aa17.31■□□□□ 0.36
APP-202ENST00000348990 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
APP-202ENST00000348990 FAM217AQ8IXS0 508 aa17.31■□□□□ 0.36
APP-202ENST00000348990 RNF175Q8N4F7 328 aa17.31■□□□□ 0.36
APP-202ENST00000348990 GGHQ92820 318 aa17.31■□□□□ 0.36
APP-202ENST00000348990 DHRS1Q96LJ7 313 aa17.31■□□□□ 0.36
APP-202ENST00000348990 PHOX2BQ99453 314 aa17.31■□□□□ 0.36
APP-202ENST00000348990 SLC30A2Q9BRI3 323 aa17.31■□□□□ 0.36
APP-202ENST00000348990 CCSER2Q9H7U1 834 aa17.31■□□□□ 0.36
APP-202ENST00000348990 MKLN1Q9UL63 735 aa17.31■□□□□ 0.36
APP-202ENST00000348990 TBKBP1A7MCY6 615 aa17.3■□□□□ 0.36
APP-202ENST00000348990 COX7A2P14406 83 aa17.3■□□□□ 0.36
APP-202ENST00000348990 MXD1Q05195 221 aa17.3■□□□□ 0.36
APP-202ENST00000348990 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
APP-202ENST00000348990 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
APP-202ENST00000348990 GPC2Q8N158 579 aa17.3■□□□□ 0.36
APP-202ENST00000348990 MAL2Q969L2 176 aa17.3■□□□□ 0.36
APP-202ENST00000348990 CD244Q9BZW8 370 aa17.3■□□□□ 0.36
APP-202ENST00000348990 CCDC177Q9NQR7 707 aaPredicted RBP17.3■□□□□ 0.36
APP-202ENST00000348990 ZFP37Q9Y6Q3 630 aaPredicted RBP17.3■□□□□ 0.36
APP-202ENST00000348990 HAS3O00219 553 aa17.3■□□□□ 0.36
APP-202ENST00000348990 TNFRSF11BO00300 401 aa17.3■□□□□ 0.36
APP-202ENST00000348990 WDR47O94967 919 aa17.3■□□□□ 0.36
APP-202ENST00000348990 CXCR2P25025 360 aa17.3■□□□□ 0.36
APP-202ENST00000348990 OR1E2P47887 323 aa17.3■□□□□ 0.36
APP-202ENST00000348990 CLCN7P51798 805 aa17.3■□□□□ 0.36
APP-202ENST00000348990 TRIM48Q8IWZ4 208 aa17.3■□□□□ 0.36
APP-202ENST00000348990 ACPTQ9BZG2 426 aa17.3■□□□□ 0.36
APP-202ENST00000348990 CRLS1Q9UJA2 301 aa17.3■□□□□ 0.36
APP-202ENST00000348990 PCDHGA6Q9Y5G7 932 aa17.3■□□□□ 0.36
APP-202ENST00000348990 SUV39H1O43463 412 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CLDN9O95484 217 aa17.29■□□□□ 0.36
APP-202ENST00000348990 C9P02748 559 aa17.29■□□□□ 0.36
APP-202ENST00000348990 RHOCP08134 193 aa17.29■□□□□ 0.36
APP-202ENST00000348990 UGT2B15P54855 530 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CD83Q01151 205 aa17.29■□□□□ 0.36
APP-202ENST00000348990 NEK5Q6P3R8 708 aa17.29■□□□□ 0.36
APP-202ENST00000348990 SLC46A3Q7Z3Q1 461 aa17.29■□□□□ 0.36
APP-202ENST00000348990 NELL1Q92832 810 aa17.29■□□□□ 0.36
APP-202ENST00000348990 MMP28Q9H239 520 aa17.29■□□□□ 0.36
APP-202ENST00000348990 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
APP-202ENST00000348990 BNIP3LO60238 219 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CSF2P04141 144 aa17.29■□□□□ 0.36
APP-202ENST00000348990 IRF1P10914 325 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CDH12P55289 794 aa17.29■□□□□ 0.36
APP-202ENST00000348990 FBLIM1Q8WUP2 373 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms