RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HSMCR30P0CW71 290 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 SLC2A4P14672 509 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 CDKN1CP49918 316 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 HK3P52790 923 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ZMAT1Q5H9K5 638 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 C10orf120Q5SQS8 335 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 Q6ZPB1 254 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 RTN4RL1Q86UN2 441 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 TTC16Q8NEE8 873 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF675Q8TD23 568 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 TMCO6Q96DC7 493 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 EXOC2Q96KP1 924 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 CCDC32Q9BV29 185 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PRRG3Q9BZD7 231 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 MUTYHQ9UIF7 546 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 DNMT3LQ9UJW3 386 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PCDHB8Q9UN66 801 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PATJQ8NI35 1801 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 MEN1O00255 615 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 STX16O14662 325 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PER2O15055 1255 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 CNPP09543 421 aaKnown RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ITGA2P17301 1181 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PIK3CBP42338 1070 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 OR1G1P47890 313 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 RPL38P63173 70 aaKnown RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 CD83Q01151 205 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 RAD51Q06609 339 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ELP6Q0PNE2 266 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ABRAXAS2Q15018 415 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 PTPRRQ15256 657 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 KRTCAP2Q8N6L1 136 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 BHMTQ93088 406 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 FAM120BQ96EK7 910 aaKnown RBP18.13■□□□□ 0.49
SCARF1-202ENST00000348987 ROGDIQ9GZN7 287 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 CRISPLD1Q9H336 500 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 MARCH2Q9P0N8 246 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 SPEF1Q9Y4P9 236 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 LCHNA4D1U4 455 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 TNFSF8P32971 234 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 SOX6P35712 828 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 ACVR1Q04771 509 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 TBCEQ15813 527 aaPredicted RBP18.12■□□□□ 0.49
SCARF1-202ENST00000348987 NADSYN1Q6IA69 706 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 ERAP2Q6P179 960 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 OR4L1Q8NH43 312 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 SNAPC3Q92966 411 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 C1QTNF3Q9BXJ4 246 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 RUBCNLQ9H714 662 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 CD274Q9NZQ7 290 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 KLHL20Q9Y2M5 609 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 IL7P13232 177 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 HNF4AP41235 474 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 MAGEA2P43356 314 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 RGRP47804 291 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 TAF10Q12962 218 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 NPRL3Q12980 569 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 ARMCX4Q5H9R4 360 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 FAM171A1Q5VUB5 890 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 SLC7A6Q92536 515 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 GPR21Q99679 349 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
SCARF1-202ENST00000348987 CCSER2Q9H7U1 834 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 CATSPERZQ9NTU4 200 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 C1orf109Q9NX04 203 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 SIRT5Q9NXA8 310 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
SCARF1-202ENST00000348987 FNDC3AQ9Y2H6 1198 aaKnown RBP18.12■□□□□ 0.49
SCARF1-202ENST00000348987 RGS5O15539 181 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 KIAA0513O60268 411 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 UGT2B17O75795 530 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 PGRP06401 933 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 AZGP1P25311 298 aaKnown RBP18.11■□□□□ 0.49
SCARF1-202ENST00000348987 KCNQ1P51787 676 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 STC1P52823 247 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 BAK1Q16611 211 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 C18orf21Q32NC0 220 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-202ENST00000348987 GPAT3Q53EU6 434 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 GALNT10Q86SR1 603 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 FAM109AQ8N4B1 249 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 ZBTB18Q99592 522 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 MKRN2Q9H000 416 aaKnown RBP18.11■□□□□ 0.49
SCARF1-202ENST00000348987 FNIP2Q9P278 1114 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 PCDHGB2Q9Y5G2 931 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 A0A1W2PQ72 361 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 RPP40O75818 363 aaKnown RBP18.11■□□□□ 0.49
SCARF1-202ENST00000348987 OAZ2O95190 189 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 RGS6P49758 472 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 NUDT6P53370 316 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 IL10RBQ08334 325 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF235Q14590 738 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 TAB1Q15750 504 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 CDONQ4KMG0 1287 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 GPR153Q6NV75 609 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 FBXO32Q969P5 355 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 CDKN2AIPNLQ96HQ2 116 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 PSORS1C1Q9UIG5 152 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms