RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ZNF16P17020 682 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-201ENST00000340660 VCLP18206 1134 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 CXCR2P25025 360 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 SPINT3P49223 89 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 NEK4P51957 841 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 OCRLQ01968 901 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 HSPB2Q16082 182 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 NFIL3Q16649 462 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 MEP1AQ16819 746 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 VWA3BQ502W6 1294 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 ARMC12Q5T9G4 340 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 TTI2Q6NXR4 508 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 DNM1P46Q6ZS02 220 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 PLEKHM3Q6ZWE6 761 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 DNAJC22Q8N4W6 341 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 GAL3ST3Q96A11 431 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 PSKH2Q96QS6 385 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 PKP2Q99959 881 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 CHRNA10Q9GZZ6 450 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 SRMSQ9H3Y6 488 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 CXorf56Q9H5V9 222 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 CUTCQ9NTM9 273 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 TMEM51Q9NW97 253 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 TRMT1Q9NXH9 659 aaKnown RBP10.41□□□□□ -0.74
ATXN3-201ENST00000340660 ROS1P08922 2347 aa10.41□□□□□ -0.74
ATXN3-201ENST00000340660 A0A0J9YYE9 177 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 GTPBP10A4D1E9 387 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 UBFD1O14562 309 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 BCKDKO14874 412 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 STX10O60499 249 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 TRBC1P01850 177 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 EPHB2P29323 1055 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 ACVR1BP36896 505 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CCNFP41002 786 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 PAPOLAP51003 745 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 ARSFP54793 590 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 EMP2P54851 167 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 DCDC1P59894 354 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 VLDLRP98155 873 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 DSC2Q02487 901 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CUL4BQ13620 913 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 NFE2L1Q14494 772 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 ZNF569Q5MCW4 686 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 FIGLAQ6QHK4 219 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 ARHGAP36Q6ZRI8 547 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 RRAGAQ7L523 313 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 TRAPPC5Q8IUR0 188 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 PYROXD2Q8N2H3 581 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 KCT2Q8NC54 265 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 C1orf131Q8NDD1 294 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CREB3L4Q8TEY5 395 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 FAM168AQ92567 244 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 DHX58Q96C10 678 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 C12orf66Q96MD2 445 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 SMC6Q96SB8 1091 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CNPPD1Q9BV87 410 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 METTL14Q9HCE5 456 aaKnown RBP10.4□□□□□ -0.74
ATXN3-201ENST00000340660 PRDM7Q9NQW5 492 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CNTN6Q9UQ52 1028 aa10.4□□□□□ -0.74
ATXN3-201ENST00000340660 CASKO14936 926 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 KLRC4O43908 158 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 WDR1O75083 606 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 CDK14O94921 469 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 MCM3P25205 808 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 CYLC1P35663 651 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ANAPC15P60006 121 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 OCA2Q04671 838 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 TRIM14Q14142 442 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ETFDHQ16134 617 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 SPESP1Q6UW49 350 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ARHGEF19Q8IW93 802 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 RAVER1Q8IY67 606 aaKnown RBP10.39□□□□□ -0.75
ATXN3-201ENST00000340660 PGBD5Q8N414 524 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 CCDC185Q8N715 623 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ZFAND2BQ8WV99 257 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ASB11Q8WXH4 323 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 GCDHQ92947 438 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-201ENST00000340660 GLYATL1Q969I3 302 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 PLPPR2Q96GM1 343 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 KREMEN1Q96MU8 473 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 TUBB6Q9BUF5 446 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 SLC39A8Q9C0K1 460 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 WWP1Q9H0M0 922 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ACTR10Q9NZ32 417 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 ZNF282Q9UDV7 671 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-201ENST00000340660 PLCL2Q9UPR0 1127 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 PCDHGB1Q9Y5G3 927 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 LIPGQ9Y5X9 500 aa10.39□□□□□ -0.75
ATXN3-201ENST00000340660 MED12Q93074 2177 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 KIAA1549Q9HCM3 1950 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 IGLV3-12A0A075B6K2 115 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 OR14I1A6ND48 311 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 C2orf74A8MZ97 194 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
ATXN3-201ENST00000340660 SLITRK5O94991 958 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms