RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SCAMP5Q8TAC9 235 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 DCAKDQ8WVC6 231 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 HAS1Q92839 578 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 KLHL15Q96M94 604 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 OR10A4Q9H209 315 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 BRINP1O60477 761 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 RHOQP17081 205 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 GNAZP19086 355 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 KLHL22Q53GT1 634 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 NIFKQ9BYG3 293 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 POLR2J3Q9H1A7 115 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 FBRSQ9HAH7 460 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 TCAF1Q9Y4C2 921 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 RPLP0P05388 317 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 SFTPBP07988 381 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 DNAJA1P31689 397 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 BDKRB1P46663 353 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 FNTBP49356 437 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 PPP1R8Q12972 351 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 FAM92BQ6ZTR7 304 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 SMG9Q9H0W8 520 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 ACSS3Q9H6R3 686 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 RMI1Q9H9A7 625 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 OR6C70A6NIJ9 312 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 CLDN25C9JDP6 229 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 ARPC2O15144 300 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 CRISP3P54108 245 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 FOXK1P85037 733 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 SLC35F1Q5T1Q4 408 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 DQX1Q8TE96 717 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 TAC3Q9UHF0 121 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 CDC14AQ9UNH5 594 aa11.5□□□□□ -0.57
SHANK2-201ENST00000338508 REXO2Q9Y3B8 237 aaKnown RBP11.5□□□□□ -0.57
SHANK2-201ENST00000338508 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 HTR3EA5X5Y0 456 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SYNGR4O95473 234 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 BCKDHAP12694 445 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 CD53P19397 219 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 MLLT6P55198 1093 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SNTA1Q13424 505 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ECM1Q16610 540 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 TIGD6Q17RP2 521 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 LRRC66Q68CR7 880 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SUN5Q8TC36 379 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 CAPNS2Q96L46 248 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 HMGXB4Q9UGU5 601 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 MYBPHLA2RUH7 354 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 IRF9Q00978 393 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 AIMP2Q13155 320 aaKnown RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 UGT8Q16880 541 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 TRAPPC6BQ86SZ2 158 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SLITRK4Q8IW52 837 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 UBQLNLQ8IYU4 475 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 OXR1Q8N573 874 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 RBM15BQ8NDT2 890 aaKnown RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 RGMAQ96B86 450 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 NUDT15Q9NV35 164 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 LAMP5Q9UJQ1 280 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 MMP20O60882 483 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 FHP07954 510 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SLC1A5Q15758 541 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 TMPPEQ6ZT21 453 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 RIOK2Q9BVS4 552 aaKnown RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 PDE10AQ9Y233 779 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 WNT9AO14904 365 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ZNF35P13682 527 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 VIPR1P32241 457 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 PTGS2P35354 604 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 NSG1P42857 185 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 SGCAQ16586 387 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 MARCH9Q86YJ5 346 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ZNF282Q9UDV7 671 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 PI15O43692 258 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 CYP11A1P05108 521 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 HNRNPCL4P0DMR1 293 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 ADH5P11766 374 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 GNG2P59768 71 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 RPS14P62263 151 aaKnown RBP11.49□□□□□ -0.57
SHANK2-201ENST00000338508 GDPD4Q6W3E5 623 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 PNPLA2Q96AD5 504 aa11.49□□□□□ -0.57
SHANK2-201ENST00000338508 HSPBAP1Q96EW2 488 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms