RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 EBF1Q9UH73 591 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 NPEPPSL1A6NEC2 478 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PRR23D1E9PI22 279 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 NIPSNAP2O75323 286 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 POP7O75817 140 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PRR23D2P0DMB1 279 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ARRB1P49407 418 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ALDH6A1Q02252 535 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 DNASE1L3Q13609 305 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 RBM20Q5T481 1227 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 SYT12Q8IV01 421 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CPNE9Q8IYJ1 553 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ADAMTS19Q8TE59 1207 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 GLYATL1Q969I3 302 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 YIPF2Q9BWQ6 316 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 C20orf27Q9GZN8 174 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 MARCH7Q9H992 704 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 H2AFY2Q9P0M6 372 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CLCA2Q9UQC9 943 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 BCKDKO14874 412 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ARPC2O15144 300 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 DHRS4L1P0CG22 281 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ATP1B2P14415 290 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TCF3P15923 654 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 MAPK1P28482 360 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 CSTF1Q05048 431 aaKnown RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 NFATC2Q13469 925 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TSNQ15631 228 aaKnown RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 SYT16Q17RD7 645 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 C5orf22Q49AR2 442 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TRIQKQ629K1 86 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF549Q6P9A3 640 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 KLHL17Q6TDP4 642 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TIFABQ6ZNK6 161 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 P2RY8Q86VZ1 359 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ANKRD46Q86W74 232 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 OR10Q1Q8NGQ4 319 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 GTPBP2Q9BX10 602 aaKnown RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 FZD3Q9NPG1 666 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TNPO3Q9Y5L0 923 aaKnown RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 A0A0U1RQS6 177 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 A8MT66 165 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ISM1B1AKI9 464 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 SERPINI2O75830 405 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 OR4F21O95013 312 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TNFP01375 233 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 CAPN1P07384 714 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 IL7RP16871 459 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 POLD2P49005 469 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM115Q12893 351 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 DENND5AQ6IQ26 1287 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 SLC36A4Q6YBV0 504 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 SGK2Q9HBY8 427 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 PSMD11O00231 422 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 NPHS1O60500 1241 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 EPN2O95208 641 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ALOX5P09917 674 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 IMPDH2P12268 514 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 IGFBP5P24593 272 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 NAPRTQ6XQN6 538 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 TRAM1L1Q8N609 369 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 FAM46DQ8NEK8 389 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 FATE1Q969F0 183 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 ROPN1LQ96C74 230 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 CCDC3Q9BQI4 270 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 SUSD2Q9UGT4 822 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 MMP17Q9ULZ9 603 aa11.47□□□□□ -0.57
HDAC6-201ENST00000334136 HEMK1Q9Y5R4 338 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-201ENST00000334136 BPIP17213 487 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 S100A1P23297 94 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 STC1P52823 247 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 OR10G6Q8NH81 332 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 FNDC8Q8TC99 324 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 OTUB1Q96FW1 271 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 FCRL3Q96P31 734 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 PANX1Q96RD7 426 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 RANBP9Q96S59 729 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ABCG4Q9H172 646 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ADPRHL2Q9NX46 363 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 IL17CQ9P0M4 197 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 MUTYHQ9UIF7 546 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 LOC285095A0A1B0GVY8 99 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 CAPN14A8MX76 684 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 FAM25AB3EWG3 89 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 FAM25CB3EWG5 89 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 FAM25GB3EWG6 89 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 LOC110117498-PIK3R3F6TDL0 507 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 SOX1O00570 391 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 RFXANKO14593 260 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 GRID2O43424 1007 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms