RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GRHL2Q6ISB3 625 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 MSANTD1Q6ZTZ1 278 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 TMIEQ8NEW7 156 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 MIPOL1Q8TD10 442 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 FAM120BQ96EK7 910 aaKnown RBP16.85■□□□□ 0.29
DDX28-201ENST00000332395 FBXL20Q96IG2 436 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 CD320Q9NPF0 282 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 TIMMDC1Q9NPL8 285 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 DEC1Q9P2X7 70 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 A0A0J9YVX5 310 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 EDDM13A0A1B0GTR0 161 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 CCDC160A6NGH7 325 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 H0YIV9 168 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 H3BM21 787 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 RFXANKO14593 260 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 ZSCAN9O15535 394 aaPredicted RBP16.85■□□□□ 0.29
DDX28-201ENST00000332395 HNF4AP41235 474 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 GZMMP51124 257 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 ELP6Q0PNE2 266 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 MTAPQ13126 283 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 NKG7Q16617 165 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 CYBRD1Q53TN4 286 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 BORAQ6PGQ7 559 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 DHRSXQ8N5I4 330 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 HM13Q8TCT9 377 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 NCLNQ969V3 563 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 TMBIM1Q969X1 311 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 NUS1Q96E22 293 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 FADS3Q9Y5Q0 445 aa16.85■□□□□ 0.29
DDX28-201ENST00000332395 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 PLK4O00444 970 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 PFDN1O60925 122 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 SNAP29O95721 258 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 CLIC3O95833 236 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 CDK4P11802 303 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 CAPGP40121 348 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 MTHFRP42898 656 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 ELAVL3Q14576 367 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 DPY19L1Q2PZI1 675 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 BCL7AQ4VC05 210 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 OTUD3Q5T2D3 398 aaPredicted RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 GPR149Q86SP6 731 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 TRAPPC5Q8IUR0 188 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 NPAS3Q8IXF0 933 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 ZNF786Q8N393 782 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 TRIML2Q8N7C3 387 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 SLC47A1Q96FL8 570 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 ZCCHC2Q9C0B9 1178 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 REXO4Q9GZR2 422 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 OR2AG1Q9H205 316 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 SGK2Q9HBY8 427 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 DDX18Q9NVP1 670 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 PRMT3O60678 531 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 LILRB5O75023 590 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 CREG1O75629 220 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 RETP07949 1114 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 C6P13671 934 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 RPL10P27635 214 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 PCDH1Q08174 1060 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 RAET1GQ6H3X3 334 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 PDE12Q6L8Q7 609 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 TTC33Q6PID6 262 aaPredicted RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 UBE2Q1Q7Z7E8 422 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 SFTPA1Q8IWL2 248 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 CFAP206Q8IYR0 622 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 OR7A2PQ8NGA2 310 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 NELL1Q92832 810 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 ASB16Q96NS5 453 aa16.84■□□□□ 0.29
DDX28-201ENST00000332395 DCAF13Q9NV06 445 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 RUVBL1Q9Y265 456 aaKnown RBP16.84■□□□□ 0.29
DDX28-201ENST00000332395 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 PRKD3O94806 890 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 C1orf105O95561 183 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 ADRB3P13945 408 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 GPR1P46091 355 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 HNRNPFP52597 415 aaKnown RBP16.83■□□□□ 0.28
DDX28-201ENST00000332395 ARSFP54793 590 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 SRSF11Q05519 484 aaKnown RBP16.83■□□□□ 0.28
DDX28-201ENST00000332395 ACSM2AQ08AH3 577 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 ABHD18Q0P651 414 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 EIF4HQ15056 248 aaKnown RBP16.83■□□□□ 0.28
DDX28-201ENST00000332395 PON2Q15165 354 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 UGT8Q16880 541 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 KCTD21Q4G0X4 260 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 ACSM2BQ68CK6 577 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 ADNP2Q6IQ32 1131 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 ZNF765Q7L2R6 523 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 REXO5Q96IC2 774 aaKnown RBP16.83■□□□□ 0.28
DDX28-201ENST00000332395 BRF2Q9HAW0 419 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 PCDHGA11Q9Y5H2 935 aa16.83■□□□□ 0.28
DDX28-201ENST00000332395 MAGEB17A8MXT2 336 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 MMP20O60882 483 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 SEC24DO94855 1032 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 HSD3B1P14060 373 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 HSD3B2P26439 372 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 ALDH3A2P51648 485 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 TUBA4AP68366 448 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms