RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TLDC1Q6P9B6 456 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TTC23LQ6PF05 361 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CCDC137Q6PK04 289 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 UNC5AQ6ZN44 842 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PCGF5Q86SE9 256 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF605Q86T29 641 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 HOOK3Q86VS8 718 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TMEM126BQ8IUX1 230 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RAB42Q8N4Z0 105 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 C19orf47Q8N9M1 422 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 OR5AR1Q8NGP9 310 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 OR2L8Q8NGY9 312 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 FLVCR1-AS1Q8TAF5 88 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 LPGAT1Q92604 370 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 EXTL1Q92935 676 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ISL2Q96A47 359 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RAD51AP1Q96B01 352 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 BIRC8Q96P09 236 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 IP6K3Q96PC2 410 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 OSBPL9Q96SU4 736 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NAT9Q9BTE0 207 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 HGH1Q9BTY7 390 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 MENTQ9BUN1 341 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NLNQ9BYT8 704 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SOHLH2Q9NX45 425 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SYBUQ9NX95 663 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ANKMY1Q9P2S6 941 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RNF14Q9UBS8 474 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 LNPEPQ9UIQ6 1025 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ANAPC2Q9UJX6 822 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CROTQ9UKG9 612 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SNX12Q9UMY4 172 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ANKRD11Q6UB99 2663 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 GSAPA4D1B5 854 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SLC9B1P1A6NJY1 282 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF839A8K0R7 811 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 VGLL3A8MV65 326 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 E7EQ34 232 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RASGRF2O14827 1237 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PRICKLE3O43900 615 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 OR1I1O60431 355 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 KLHL41O60662 606 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SCRG1O75711 98 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 USP1O94782 785 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 VAPBO95292 243 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TTC4O95801 387 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PRSS56P0CW18 603 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TPBGLP0DKB5 382 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CBSLP0DN79 551 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ENO3P13929 434 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 ST6GAL1P15907 406 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 UGT2B7P16662 529 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 MGAT1P26572 445 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NMBRP28336 390 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 OAS2P29728 719 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 CXCR5P32302 372 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CBSP35520 551 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 HSD17B2P37059 387 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PEX19P40855 299 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 KCNJ1P48048 391 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 POLE2P56282 527 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SESN2P58004 480 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 RPS15P62841 145 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 RELAQ04206 551 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 GPS1Q13098 491 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PTK6Q13882 451 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 LY6DQ14210 128 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 FRG1Q14331 258 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 TCTN3Q6NUS6 607 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TTC27Q6P3X3 843 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CAND1Q86VP6 1230 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 CILP2Q8IUL8 1156 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PPIL6Q8IXY8 311 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 GPR135Q8IZ08 494 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NAT8LQ8N9F0 302 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 GSDMBQ8TAX9 411 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CT55Q8WUE5 264 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 DLG3Q92796 817 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 KCNJ9Q92806 393 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZUFSPQ96AP4 578 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 LRRC39Q96DD0 335 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 MFSD3Q96ES6 412 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 FOPNLQ96NB1 174 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF285Q96NJ3 590 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 FAM167BQ9BTA0 163 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PIH1D1Q9NWS0 290 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 IL1RAPL1Q9NZN1 696 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 MARCH4Q9P2E8 410 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 REV1Q9UBZ9 1251 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 IL17BQ9UHF5 180 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PCDHGA9Q9Y5G4 932 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZCWPW2A0A1B0GU75 182 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 TMEM150CB9EJG8 249 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CCDC188H7C350 402 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 J3QKU1 62 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 FANCGO15287 622 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 SUV39H1O43463 412 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 PSIP1O75475 530 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms