RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ARL9Q6T311 187 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 SNX29P2Q8IUI4 249 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 FZD4Q9ULV1 537 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 CHRM5P08912 532 aaPredicted RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 IL7P13232 177 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 YBEYP58557 167 aaPredicted RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TARBP2Q15633 366 aaKnown RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 NR4A3Q92570 626 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 HBEGFQ99075 208 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TFB2MQ9H5Q4 396 aaKnown RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 ZDHHC4Q9NPG8 344 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 PCDHGA12O60330 932 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 RCBTB2O95199 551 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC3A1Q07837 685 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TBRG1Q3YBR2 411 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 BAIAP2L2Q6UXY1 529 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 GATA5Q9BWX5 397 aaPredicted RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 H3BSA7 217 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 PCDH7O60245 1069 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 CDK14O94921 469 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ASCC1Q8N9N2 400 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 B3GNT5Q9BYG0 378 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ZBTB26Q9HCK0 441 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 HCN2Q9UL51 889 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 LRRC72A6NJI9 287 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 FOXO6A8MYZ6 492 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 RASGRP1O95267 797 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 RHDQ02161 417 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 DCDC5Q6ZRR9 648 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 HDAC2Q92769 488 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 KCNN1Q92952 543 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 COL21A1Q96P44 957 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 WRAP53Q9BUR4 548 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 PPM1HQ9ULR3 514 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TECPR2O15040 1411 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF670-ZNF695F2Z2N8 137 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 RPS3P23396 243 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF366Q8N895 744 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SPATA22Q8NHS9 363 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TSNAXQ99598 290 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 BARD1Q99728 777 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ACTR6Q9GZN1 396 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF726A6NNF4 738 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ADAMTS3O15072 1205 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 FFAR2O15552 330 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 CDRT1O95170 752 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 DSC2Q02487 901 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SEMA3AQ14563 771 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TSTD2Q5T7W7 516 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 CHERPQ8IWX8 916 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 FEM1CQ96JP0 617 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 MAPKAP1Q9BPZ7 522 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 EVPLQ92817 2033 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC7A4O43246 635 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 IMPDH1P20839 514 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TLE2Q04725 743 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SYT16Q17RD7 645 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TOR1AIP1Q5JTV8 583 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 UBIAD1Q9Y5Z9 338 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 CYP1B1Q16678 543 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC8B1Q6J4K2 584 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF598Q86UK7 904 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 MFSD8Q8NHS3 518 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 RGMAQ96B86 450 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 PCDHB18PQ96TA0 734 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TMEM184CQ9NVA4 438 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 TCRBV7S2A1N4TA0A589 114 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ITGA5P08648 1049 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 ANKRD22Q5VYY1 191 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 MAGEH1Q9H213 219 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 GSKIPQ9P0R6 139 aa16.47■□□□□ 0.23
SMCHD1-201ENST00000320876 SPATA31C1P0DKV0 1188 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 FAM46DQ8NEK8 389 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 JOSD2Q8TAC2 188 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 CD180Q99467 661 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 TRAV6A0A075B6T7 132 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 FBXO48Q5FWF7 155 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 NAT16Q8N8M0 369 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 GRHL3Q8TE85 626 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 HMCESQ96FZ2 354 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 PYURFQ96I23 114 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 NECAB3Q96P71 396 aaPredicted RBP16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 WNT10BO00744 389 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 GABRDO14764 452 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 GPR152Q8TDT2 470 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 BORCS7-ASMTA0A0B4J1R7 106 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 MT-ND5P03915 603 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 APODP05090 189 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 HCKP08631 526 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 BMP8BP34820 402 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 DSTNP60981 165 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms