RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 RGS11O94810 467 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 JUNP05412 331 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 LCP1P13796 627 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 ADORA2BP29275 332 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 HSD17B2P37059 387 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PTGER3P43115 390 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 GSK3BP49841 420 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 MAZP56270 477 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TCEA2Q15560 299 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 OCLNQ16625 522 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SYT6Q5T7P8 510 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TMPRSS11BQ86T26 416 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 KLHDC8BQ8IXV7 354 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SLC37A3Q8NCC5 494 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 OR4F6Q8NGB9 312 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 THAP6Q8TBB0 222 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CANT1Q8WVQ1 401 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 OSTF1Q92882 214 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 ARL11Q969Q4 196 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 UHRF1Q96T88 793 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 MTG2Q9H4K7 406 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 RBFOX1Q9NWB1 397 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 HCN3Q9P1Z3 774 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PTGFRNQ9P2B2 879 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SNX8Q9Y5X2 465 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 BCL9O00512 1426 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CEP192Q8TEP8 1941 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 GLYATL1P3A0A0U1RQE8 302 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 MAGEB17A8MXT2 336 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPATA31C2B4DYI2 1134 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 F5H5T6 163 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TO15178 435 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CLDN9O95484 217 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TACSTD2P09758 323 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TAL1P17542 331 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TNNI3P19429 210 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 NOS3P29474 1203 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 YBEYP58557 167 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPIBQ01892 262 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CARTPTQ16568 116 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CLVS2Q5SYC1 327 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 DCST1Q5T197 706 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 C1QTNF12Q5T7M4 302 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TDRD10Q5VZ19 366 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 KIAA1161Q6NSJ0 714 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 LINGO4Q6UY18 593 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 ZSWIM9Q86XI8 627 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPATA2LQ8IUW3 424 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TOP6BLQ8N6T0 577 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 NAT16Q8N8M0 369 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 OR14K1Q8NGZ2 314 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TMBIM1Q969X1 311 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 UTP4Q969X6 686 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SERAC1Q96JX3 654 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 C10orf90Q96M02 699 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 ALPK1Q96QP1 1244 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 FNDC11Q9BVV2 318 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 DUSP16Q9BY84 665 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SCUBE2Q9NQ36 999 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SDR39U1Q9NRG7 319 aaPredicted RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SLC22A11Q9NSA0 550 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 FLRT1Q9NZU1 646 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TSR3Q9UJK0 312 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CBY1Q9Y3M2 126 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SHANK3Q9BYB0 1731 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PRSS44E7EML9 344 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 IMPA2O14732 288 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 MSI1O43347 362 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SC5DO75845 299 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 LALBAP00709 142 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 IFNA17P01571 189 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 MT-ND2P03891 347 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CATP04040 527 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TFAP2AP05549 437 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPATA31C1P0DKV0 1188 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PRKAR2AP13861 404 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PSMB4P28070 264 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 POU6F1Q14863 301 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 FAM98CQ17RN3 349 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 RETSATQ6NUM9 610 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SYT12Q8IV01 421 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 IZUMO1Q8IYV9 350 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 TCTE3Q8IZS6 198 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 Q8N402 240 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 CEP76Q8TAP6 659 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 FBXO30Q8TB52 745 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PIGXQ8TBF5 258 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SEMA4DQ92854 862 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SPATA33Q96N06 139 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 UROC1Q96N76 676 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 PSKH2Q96QS6 385 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SARS2Q9NP81 518 aaKnown RBP4.4□□□□□ -1.7
CNOT1-201ENST00000317147 AAASQ9NRG9 546 aa4.4□□□□□ -1.7
CNOT1-201ENST00000317147 SMOXQ9NWM0 555 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms