RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 RPF2Q9H7B2 306 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 CLN6Q9NWW5 311 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 SEC14L3Q9UDX4 400 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 A0A0G2JN53 185 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PRSS51A0A1B0GVH4 220 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 CTSAP10619 480 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 DBTP11182 482 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PLA2G16P53816 162 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 SPIN4Q56A73 249 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF805Q5CZA5 627 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 OR52E8Q6IFG1 317 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 GIPC3Q8TF64 312 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 NACC2Q96BF6 587 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 MYL12BO14950 172 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 AP2A2O94973 939 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 OXTRP30559 389 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 NTHL1P78549 312 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 BHLHB9Q6PI77 547 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 USP7Q93009 1102 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC9A8Q9Y2E8 581 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 RASAL1O95294 804 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 IFNW1P05000 195 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 BMP2P12643 396 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 KELP23276 732 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 HOXC8P31273 242 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 FMO3P31513 532 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 IFI44LQ53G44 452 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 PRAMEF14Q5SWL7 426 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 PRAMEF13Q5VWM6 474 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 MACC1Q6ZN28 852 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 KCNH6Q9H252 994 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 LINC00597Q9H2U6 94 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF696Q9H7X3 374 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 FAM120CQ9NX05 1096 aaKnown RBP13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 ITGB1BP2Q9UKP3 347 aa13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.32
PCDHB9-201ENST00000316105 A0A1W2PRB8 838 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 KLK1P06870 262 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SYN1P17600 705 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 MAT2AP31153 395 aaKnown RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 UGT2B15P54855 530 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 TUBA4AP68366 448 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 UBE3AQ05086 875 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 CBX3Q13185 183 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 MRPL58Q14197 206 aaKnown RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 GTDC1Q4AE62 458 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 TNFAIP8L2Q6P589 184 aaPredicted RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SLC35A5Q9BS91 424 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 TRBV23OR9-2A0A075B6M9 112 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 KPNA4O00629 521 aaPredicted RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 CCDC159P0C7I6 412 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 GJA8P48165 433 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 ARL4DP49703 201 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 MEF2AQ02078 507 aaPredicted RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 NEK5Q6P3R8 708 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 C16orf62Q7Z3J2 963 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SLCO6A1Q86UG4 719 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 LILRA2Q8N149 483 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 PELI3Q8N2H9 469 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 BPIFB1Q8TDL5 484 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 FNDC11Q9BVV2 318 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 ARMC1Q9NVT9 282 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 FBXO10Q9UK96 956 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 H3BNH8 94 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 E2F3O00716 465 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 CYP7B1O75881 506 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 MPC1LP0DKB6 136 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 IDSP22304 550 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 RGS21Q2M5E4 152 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 VITQ6UXI7 678 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 PTCHD4Q6ZW05 846 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 GOLM1Q8NBJ4 401 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 GTPBP3Q969Y2 492 aaKnown RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 C12orf66Q96MD2 445 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 EQTNQ9NQ60 294 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 TMEM98Q9Y2Y6 226 aa13.02□□□□□ -0.33
PCDHB9-201ENST00000316105 TCRBV3S1A0A5B6 114 aa13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 H0YJX3 145 aa13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 MYL12AP19105 171 aa13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 RPL10P27635 214 aaKnown RBP13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 SEC13P55735 322 aa13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 MED22Q15528 200 aa13.01□□□□□ -0.33
PCDHB9-201ENST00000316105 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms