RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GRIP2Q9C0E4 1043 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 IL21Q9HBE4 155 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 USE1Q9NZ43 259 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 CACNG3O60359 315 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.28
DDX54-202ENST00000314045 CD72P21854 359 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 GSK3BP49841 420 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 TAS2R50P59544 299 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.28
DDX54-202ENST00000314045 DOC2AQ14183 400 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 TRPV3Q8NET8 790 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 TMIEQ8NEW7 156 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 SLC12A9Q9BXP2 914 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 TPSD1Q9BZJ3 242 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 C1orf21Q9H246 121 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 PCTPQ9UKL6 214 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 LTBP1Q14766 1721 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 ENO4A6NNW6 628 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 POLR2CP19387 275 aaPredicted RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 SHMT2P34897 504 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 ACADVLP49748 655 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 XIAPP98170 497 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 C1DQ13901 141 aaKnown RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 AVL9Q8NBF6 648 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 LRTOMTQ8WZ04 291 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 RORBQ92753 470 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 DTD2Q96FN9 168 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 ANKHQ9HCJ1 492 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 AK5Q9Y6K8 562 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 CPED1A4D0V7 1026 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 GTPBP1O00178 669 aaKnown RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 SEMA4FO95754 770 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 SLC16A8O95907 504 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 MTHFD1P11586 935 aaKnown RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 S100A5P33763 92 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 CAPZA2P47755 286 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 TBPL1P62380 186 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
DDX54-202ENST00000314045 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 GPR149Q86SP6 731 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 FOXJ1Q92949 421 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 L3HYPDHQ96EM0 354 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 ADAP2Q9NPF8 381 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 EMCNQ9ULC0 261 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 CLEC4EQ9ULY5 219 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 DLGAP4Q9Y2H0 992 aa13.27□□□□□ -0.29
DDX54-202ENST00000314045 KLHL33A6NCF5 533 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 NDUFB5O43674 189 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 CDC42P60953 191 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 TICAM1Q8IUC6 712 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 CBR4Q8N4T8 237 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 MAPK15Q8TD08 544 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 REXO4Q9GZR2 422 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 HRASLS2Q9NWW9 162 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 LATO43561 262 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 PAICSP22234 425 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 PEX2P28328 305 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 MPIP34949 423 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 SUZ12Q15022 739 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 TYSND1Q2T9J0 566 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 APLFQ8IW19 511 aaPredicted RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 WDR60Q8WVS4 1066 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 CRISPLD2Q9H0B8 497 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 SCML1Q9UN30 329 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 FADS3Q9Y5Q0 445 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 PRSS51A0A1B0GVH4 220 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 IFNW1P05000 195 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 ENGP17813 658 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 IL12RB1P42701 662 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 RPL6Q02878 288 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 TRAP1Q12931 704 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 ABRAXAS2Q15018 415 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 TSACCQ96A04 125 aaPredicted RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 NMD3Q96D46 503 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 SLC35G5Q96KT7 338 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 ZSWIM3Q96MP5 696 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 TMEM74Q96NL1 305 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 TEFMQ96QE5 360 aaKnown RBP13.26□□□□□ -0.29
DDX54-202ENST00000314045 CNPPD1Q9BV87 410 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 EBF2Q9HAK2 575 aa13.26□□□□□ -0.29
DDX54-202ENST00000314045 AQP12BA6NM10 295 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 TBX10O75333 385 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms