RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 RAB43Q86YS6 212 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 ST6GAL2Q96JF0 529 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 FYTTD1Q96QD9 318 aaKnown RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 SLC30A2Q9BRI3 323 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 KCNH6Q9H252 994 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 LATS2Q9NRM7 1088 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 PSORS1C1Q9UIG5 152 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 KLHL20Q9Y2M5 609 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 PPP2R3BQ9Y5P8 575 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TRBV5-3A0A0A0MS03 114 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 GFRA2O00451 464 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SCO2O43819 266 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 ADORA3P0DMS8 318 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 ENGP17813 658 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TNFRSF1BP20333 461 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 KDELR2P33947 212 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 RGS6P49758 472 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TAF1AQ15573 450 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 ZNF605Q86T29 641 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 FAM217AQ8IXS0 508 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 ZNF683Q8IZ20 524 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 DEPDC4Q8N2C3 294 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 OR52E4Q8NGH9 312 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 UBASH3BQ8TF42 649 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 KCNJ9Q92806 393 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SPATA17Q96L03 361 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 PANX1Q96RD7 426 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SDHCQ99643 169 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 EBPLQ9BY08 206 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SPASTQ9UBP0 616 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 H3BQ06 376 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 HAS3O00219 553 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 MANBAO00462 879 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SEMA3DO95025 777 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TNFSF8P32971 234 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 ARPP19P56211 112 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 CD83Q01151 205 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 IRF3Q14653 427 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 STARD3Q14849 445 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TSTQ16762 297 aaKnown RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 LYPD8Q6UX82 237 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TRIM48Q8IWZ4 208 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 SLC39A13Q96H72 371 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 FEVQ99581 238 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 CNPPD1Q9BV87 410 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 RERGLQ9H628 205 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 RANGRFQ9HD47 186 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 NUFIP1Q9UHK0 495 aaKnown RBP14.26□□□□□ -0.13
COL6A2-202ENST00000310645 TBC1D24Q9ULP9 559 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 VPS9D1Q9Y2B5 631 aa14.26□□□□□ -0.13
COL6A2-202ENST00000310645 CLCA1A8K7I4 914 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 CLIC1O00299 241 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 WNT9AO14904 365 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 RRM2P31350 389 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SMARCB1Q12824 385 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 TBCEQ15813 527 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-202ENST00000310645 TTC23LQ6PF05 361 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 DNAJC22Q8N4W6 341 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SPPL2AQ8TCT8 520 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SELENOMQ8WWX9 145 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 GABARAPL1Q9H0R8 117 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 MUTYHQ9UIF7 546 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 OGDHLQ9ULD0 1010 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
COL6A2-202ENST00000310645 H3BM21 787 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 F2P00734 622 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 CDK1P06493 297 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 PSEN2P49810 448 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 CLCN7P51798 805 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 PARP15Q460N3 678 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 MON1AQ86VX9 555 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 APOLD1Q96LR9 279 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 NECTIN4Q96NY8 510 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 BOCQ9BWV1 1114 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 MARCH2Q9P0N8 246 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 PPT2Q9UMR5 302 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SH3BGRLO75368 114 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 ALX3O95076 343 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 CSF2P04141 144 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SLC10A3P09131 477 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 TWF1Q12792 350 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 VMACQ2NL98 169 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 RNF175Q8N4F7 328 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 VANGL1Q8TAA9 524 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-202ENST00000310645 SIGLEC11Q96RL6 698 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 RPS6KA6Q9UK32 745 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 AP3M1Q9Y2T2 418 aa14.25□□□□□ -0.13
COL6A2-202ENST00000310645 EFCAB10A6NFE3 127 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 PRLP01236 227 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 TGM4P49221 684 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 GNG2P59768 71 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 GALK2Q01415 458 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 PIK3R3Q92569 461 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 ACPTQ9BZG2 426 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 ABHD16BQ9H3Z7 469 aa14.24□□□□□ -0.13
COL6A2-202ENST00000310645 TMEM184CQ9NVA4 438 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms