RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PSKH2Q96QS6 385 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 BARD1Q99728 777 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 RHNO1Q9BSD3 238 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 MAGEH1Q9H213 219 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 SLC22A14Q9Y267 594 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CAPN15O75808 1086 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 DCKP27707 260 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CCT3P49368 545 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 ALDH6A1Q02252 535 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 EMX1Q04741 257 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 KRR1Q13601 381 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 GANABQ14697 944 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 RAB43Q86YS6 212 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 MINDY1Q8N5J2 469 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 FAM126AQ9BYI3 521 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PRDM16Q9HAZ2 1276 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 IL37Q9NZH6 218 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PCDHGA11Q9Y5H2 935 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 SPEGQ15772 3267 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 OR6C70A6NIJ9 312 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 IFRD1O00458 451 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 TPST2O60704 377 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 KERAO60938 352 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CREG1O75629 220 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 OTCP00480 354 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CRHBPP24387 322 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ALDH9A1P49189 494 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CLCA4Q14CN2 919 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 TCAIMQ8N3R3 496 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 DSN1Q9H410 356 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 DYRK4Q9NR20 520 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 MRPL17Q9NRX2 175 aaKnown RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 RAB23Q9ULC3 237 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ERVK-11Q9UQG0 969 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 Q9Y3F1 56 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CHD7Q9P2D1 2997 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 A0A096LPI6 279 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 SYN3O14994 580 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 TNFRSF1BP20333 461 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 C21orf33P30042 268 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 HNF1BP35680 557 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 OR1E2P47887 323 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 RPIAP49247 311 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ACSM2AQ08AH3 577 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 IER5LQ5T953 404 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ACSM2BQ68CK6 577 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 OR4F3Q6IEY1 312 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 UBE2R2Q712K3 238 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 EIF3MQ7L2H7 374 aaKnown RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 STK40Q8N2I9 435 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 MFSD2AQ8NA29 543 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 KIAA1191Q96A73 305 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ATOH8Q96SQ7 321 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 PKMYT1Q99640 499 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 C2orf49Q9BVC5 232 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 SP140LQ9H930 580 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 PTGER1P34995 402 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 SLC15A1P46059 708 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 DNAJB13P59910 316 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 DSC1Q08554 894 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 TAF1AQ15573 450 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ZSWIM7Q19AV6 140 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 LRRC66Q68CR7 880 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CCDC149Q6ZUS6 474 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 GHDCQ8N2G8 530 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 LILRA3Q8N6C8 439 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 OR5K1Q8NHB7 308 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CD200R1Q8TD46 325 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 HDAC2Q92769 488 aaKnown RBP12.31□□□□□ -0.44
RETREG3-201ENST00000309428 SLC2A11Q9BYW1 496 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ITM2BQ9Y287 266 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 ARID1AO14497 2285 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 CACNA1CQ13936 2221 aa12.31□□□□□ -0.44
RETREG3-201ENST00000309428 H0YJX3 145 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 PRLP01236 227 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 PGRP06401 933 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 RAB15P59190 212 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF284Q2VY69 593 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 CTSL3PQ5NE16 218 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 SNAP47Q5SQN1 464 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 Q6ZVL8 140 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 TICAM1Q8IUC6 712 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 CHST14Q8NCH0 376 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
RETREG3-201ENST00000309428 GANCQ8TET4 914 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 C1GALT1C1Q96EU7 318 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 ART5Q96L15 291 aa12.3□□□□□ -0.44
RETREG3-201ENST00000309428 C1orf74Q96LT6 269 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms