RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SLC38A4Q969I6 547 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CEP295NLQ96MC4 621 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 KCND1Q9NSA2 647 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 KIAA0100Q14667 2235 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF33AQ06730 810 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 TTC23Q5W5X9 447 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 FRRS1Q6ZNA5 592 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 SPPL2CQ8IUH8 684 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 NAT8LQ8N9F0 302 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PTCHD1Q96NR3 888 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 HERPUD2Q9BSE4 406 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MRM3Q9HC36 420 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PDP1Q9P0J1 537 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PROZP22891 400 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 OMPP47874 163 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CRISP3P54108 245 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 HMGCS1Q01581 520 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 GOLGA7Q7Z5G4 137 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 GHDCQ8N2G8 530 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CHST14Q8NCH0 376 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PTGES2Q9H7Z7 377 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MYRFQ9Y2G1 1151 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PAPPA2Q9BXP8 1791 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 ASNA1O43681 348 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 SERPINA1P01009 418 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CLDN2P57739 230 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CAMK1Q14012 370 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 OR10A6Q8NH74 314 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 C17orf62Q9BQA9 187 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 KHDRBS3O75525 346 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CYB5AP00167 134 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 RCVRNP35243 200 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 OR4D2P58180 307 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 SP140Q13342 867 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 TMEFF1Q8IYR6 380 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 RASGEF1AQ8N9B8 481 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CLSTN3Q9BQT9 956 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 P2RX2Q9UBL9 471 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PGAP2Q9UHJ9 254 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 BRWD3Q6RI45 1802 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MYOCOSA0A1B0GUC4 107 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 LOC730098B7Z3J9 87 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 HCN1O60741 890 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 AGR2O95994 175 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 RENP00797 406 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 GNALP38405 381 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ST13P50502 369 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SRP54P61011 504 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ISLR2Q6UXK2 745 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 CHERPQ8IWX8 916 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 MREGQ8N565 214 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 POP5Q969H6 163 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 PIWIL1Q96J94 861 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 CTPS2Q9NRF8 586 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SIX3O95343 332 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 DPP6P42658 865 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ARFIP1P53367 373 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF267Q14586 743 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 MLF2Q15773 248 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 MZT2AQ6P582 158 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ASPGQ86U10 573 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 MAU2Q9Y6X3 613 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 FADS2P1A8MWK0 482 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 OR1I1O60431 355 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 CHRNGP07510 517 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC6A11P48066 632 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 KCNJ2P63252 427 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 NOXRED1Q6NXP6 359 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SH3GL2Q99962 352 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 DUSP23Q9BVJ7 150 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC46A2Q9BY10 475 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 OR51B5Q9H339 312 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 CD248Q9HCU0 757 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 NME6O75414 186 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 CTSKP43235 329 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 TNFRSF4P43489 277 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 ARHGAP8P85298 464 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 DMWDQ09019 674 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 TSPAN14Q8NG11 270 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 OR2T34Q8NGX1 318 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 PSKH2Q96QS6 385 aa10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 SPIN1Q9Y657 262 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-201ENST00000307142 FEZF1A0PJY2 475 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 CPSF4LA6NMK7 179 aaKnown RBP10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 WASHC1A8K0Z3 465 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 WASH3PC4AMC7 463 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 ZSWIM7Q19AV6 140 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 PTCHD3Q3KNS1 767 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 TCEAL6Q6IPX3 200 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 WASH2PQ6VEQ5 465 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 SETD6Q8TBK2 473 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 SHISA4Q96DD7 197 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms