RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 KLHL20Q9Y2M5 609 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 GSAPA4D1B5 854 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 GSTM1P09488 218 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SLC6A4P31645 630 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 KIR3DL1P43629 444 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 PRKAG1P54619 331 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 RACK1P63244 317 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ADARB1P78563 741 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SMAD3P84022 425 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 SLC14A1Q13336 389 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ATAD3BQ5T9A4 648 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 ADNP2Q6IQ32 1131 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 CCBE1Q6UXH8 406 aaPredicted RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 BCDIN3DQ7Z5W3 292 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 B3GNT8Q7Z7M8 397 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 WDR36Q8NI36 951 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 NACC2Q96BF6 587 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 MTERF3Q96E29 417 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 PKP4Q99569 1192 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 TP63Q9H3D4 680 aaPredicted RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 KAT8Q9H7Z6 458 aaKnown RBP14.17□□□□□ -0.14
PTPN9-201ENST00000306726 KLHL3Q9UH77 587 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 BTBD3Q9Y2F9 522 aa14.17□□□□□ -0.14
PTPN9-201ENST00000306726 CCRL2O00421 344 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 PDYNP01213 254 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 GGT1P19440 569 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 RPS26P62854 115 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 GPNMBQ14956 572 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TPRG1LQ5T0D9 272 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 LINC01599Q8WXQ3 324 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 APIPQ96GX9 242 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TRIM62Q9BVG3 475 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 WDR12Q9GZL7 423 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 LINC00597Q9H2U6 94 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ZDHHC6Q9H6R6 413 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 THUMPD1Q9NXG2 353 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 COL4A6Q14031 1691 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CACNA1IQ9P0X4 2223 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 SPNP16150 400 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TNNI3P19429 210 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 RNF144AP50876 292 aaPredicted RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CRISP3P54108 245 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 SNRPD2P62316 118 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 IL10RBQ08334 325 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CHIT1Q13231 466 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 USP41Q3LFD5 358 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 DLEU7Q6UYE1 221 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ADCK2Q7Z695 626 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ANKRD13BQ86YJ7 626 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 PCNPQ8WW12 178 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 DERL2Q9GZP9 239 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 RMND5AQ9H871 391 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ZFYVE1Q9HBF4 777 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CAPN10Q9HC96 672 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TUBA8Q9NY65 449 aaPredicted RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ANK1P16157 1881 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 TCRBV5S2A0A599 114 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 E2F3O00716 465 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 MED26O95402 600 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 EPORP19235 508 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 HTR1EP28566 365 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CHI3L1P36222 383 aaPredicted RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ATP6V1E1P36543 226 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 VLDLRP98155 873 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 OR2T5Q6IEZ7 315 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 OR2T29Q8NH02 315 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 OR5K1Q8NHB7 308 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CRISPLD1Q9H336 500 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 SLC25A37Q9NYZ2 338 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 INTS6Q9UL03 887 aaKnown RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 FAM92AA1XBS5 289 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 EFCAB10A6NFE3 127 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 WWP2O00308 870 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 HTR1AP08908 422 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CCDC159P0C7I6 412 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 PTCHD3Q3KNS1 767 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ADAMTSL2Q86TH1 951 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 RTN4RL1Q86UN2 441 aaPredicted RBP14.16□□□□□ -0.14
PTPN9-201ENST00000306726 ARMC8Q8IUR7 673 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 PHYKPLQ8IUZ5 450 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 OR9Q2Q8NGE9 314 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 GTF2H4Q92759 462 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 SCAMP4Q969E2 229 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 FBXO10Q9UK96 956 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 RWDD3Q9Y3V2 267 aa14.16□□□□□ -0.14
PTPN9-201ENST00000306726 PRR23AA6NEV1 266 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 CCDC85CA6NKD9 419 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 AP3D1O14617 1153 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 FABP3P05413 133 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 NAE1Q13564 534 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 RAB41Q5JT25 222 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 OLIG3Q7RTU3 272 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 CHPT1Q8WUD6 406 aa14.15□□□□□ -0.14
PTPN9-201ENST00000306726 RELTQ969Z4 430 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms