RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IL36AQ9UHA7 158 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 DYRK1BQ9Y463 629 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ARHGEF33A8MVX0 844 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 E7EQ34 232 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 ABCB7O75027 752 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 PFKLP17858 780 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 HPCAL1P37235 193 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
CDH8-201ENST00000299345 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
CDH8-201ENST00000299345 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 TMPRSS11BQ86T26 416 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 ADAMTS16Q8TE57 1224 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 REEP1Q9H902 201 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 TBC1D23Q9NUY8 699 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 SCN3BQ9NY72 215 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 DIRAS1O95057 198 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 PRSS23O95084 383 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 FGF19O95750 216 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 RHOP08100 348 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 NRIP1P48552 1158 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 VMACQ2NL98 169 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 OR2T5Q6IEZ7 315 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 TRMT11Q7Z4G4 463 aaKnown RBP13.19□□□□□ -0.3
CDH8-201ENST00000299345 OR2T29Q8NH02 315 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 ING5Q8WYH8 240 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 GLYATL1Q969I3 302 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 SH3KBP1Q96B97 665 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 FAM120CQ9NX05 1096 aaKnown RBP13.19□□□□□ -0.3
CDH8-201ENST00000299345 TMPRSS11EQ9UL52 423 aa13.19□□□□□ -0.3
CDH8-201ENST00000299345 H3BMQ9 156 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 AREL1O15033 823 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 PRMT3O60678 531 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 FABP3P05413 133 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 GSTM1P09488 218 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 AQP1P29972 269 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 ASMTP46597 345 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 PFN3P60673 137 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 PHEXP78562 749 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 GSTM4Q03013 218 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CD47Q08722 323 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 TMEM115Q12893 351 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 C16orf87Q6PH81 154 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 NEK10Q6ZWH5 1172 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 GALNT10Q86SR1 603 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CROCCP3Q8IVE0 287 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 GPR65Q8IYL9 337 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 COG8Q96MW5 612 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CCM2Q9BSQ5 444 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SERHLQ9NQF3 203 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SLC9A3R1O14745 358 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 ATE1O95260 518 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 TIMP2P16035 220 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH8-201ENST00000299345 CTNNB1P35222 781 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 ENTPD1P49961 510 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CTSCP53634 463 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SF1Q15637 639 aaKnown RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 ANKRD34AQ69YU3 496 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 LILRA6Q6PI73 481 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 NODALQ96S42 347 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 LTB4R2Q9NPC1 389 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 PDP1Q9P0J1 537 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 TRIM64CA6NLI5 447 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SH3BP5O60239 455 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 LILRB3O75022 631 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 XYLBO75191 536 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SLC16A8O95907 504 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 KDELR2P33947 212 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 SPPL2AQ8TCT8 520 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 ZCCHC2Q9C0B9 1178 aaKnown RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 NAA50Q9GZZ1 169 aaKnown RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 TMEM9Q9P0T7 183 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 STOX2Q9P2F5 926 aaPredicted RBP13.18□□□□□ -0.3
CDH8-201ENST00000299345 GMPPBQ9Y5P6 360 aa13.18□□□□□ -0.3
CDH8-201ENST00000299345 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 LAMP1P11279 417 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 CRHBPP24387 322 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 NTHL1P78549 312 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 PIGFQ07326 219 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 CAPN13Q6MZZ7 669 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms