RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 GGT1P19440 569 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 CD22P20273 847 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 FOXM1Q08050 763 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 NFE2L1Q14494 772 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 GALNT18Q6P9A2 607 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 ADCK2Q7Z695 626 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 FAM124AQ86V42 546 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 MSRB3Q8IXL7 192 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 MCOLN3Q8TDD5 553 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 SNX19Q92543 992 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 KCTD5Q9NXV2 234 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 SPASTQ9UBP0 616 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 ANAPC1Q9H1A4 1944 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 RFXANKO14593 260 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 KLK8O60259 260 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 TULP3O75386 442 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 ALPPL2P10696 532 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 COX7A2P14406 83 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 POU2F1P14859 743 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 PTNP21246 168 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 OR1E2P47887 323 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 DGKGP49619 791 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 ALDH3A2P51648 485 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 PON2Q15165 354 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 C1orf52Q8N6N3 182 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 FRMD1Q8N878 549 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 HERC2P3Q9BVR0 1158 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 AMBRA1Q9C0C7 1298 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 REXO4Q9GZR2 422 aaKnown RBP13.12□□□□□ -0.31
TTC39B-201ENST00000297615 TIMMDC1Q9NPL8 285 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 C1orf109Q9NX04 203 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
TTC39B-201ENST00000297615 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 M0R129 80 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 UPK1AO00322 258 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ANKRD28O15084 1053 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 YY2O15391 372 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ALPLP05186 524 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 LAMP1P11279 417 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PTPN2P17706 415 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 EMP3P54852 163 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 NUP107P57740 925 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 TMEM115Q12893 351 aaPredicted RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 DHCR24Q15392 516 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ZNF284Q2VY69 593 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PTRH1Q86Y79 214 aaKnown RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PACRGLQ8N7B6 248 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 SGK2Q9HBY8 427 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 KLHL33A6NCF5 533 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 H0Y858 1186 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 CREG1O75629 220 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 KRT6AP02538 564 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 KRT6BP04259 564 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 FUT4P22083 530 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 JAK1P23458 1154 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 KRT6CP48668 564 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 TUBA4AP68366 448 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 OCA2Q04671 838 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 ITGADQ13349 1161 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 DOC2AQ14183 400 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PCBP2Q15366 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PARS2Q7L3T8 475 aaKnown RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 THAP5Q7Z6K1 395 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 UGT2B28Q9BY64 529 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 SLC32A1Q9H598 525 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 SNX8Q9Y5X2 465 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 INMTO95050 263 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 EPHX1P07099 455 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 SDC1P18827 310 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PBX2P40425 430 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 MAP2K4P45985 399 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 NRIP1P48552 1158 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 RPS26P62854 115 aaKnown RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 CD47Q08722 323 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 CTU2Q2VPK5 515 aaKnown RBP13.11□□□□□ -0.31
TTC39B-201ENST00000297615 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
TTC39B-201ENST00000297615 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms