RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 HOXC13P31276 330 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 KRT20P35900 424 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 INO80DQ53TQ3 878 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 ADNP2Q6IQ32 1131 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 SBSNQ6UWP8 590 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 GPR65Q8IYL9 337 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 TTC30BQ8N4P2 665 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 BRINP2Q9C0B6 783 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 DSN1Q9H410 356 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 C5orf42Q9H799 3197 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 SOBPA7XYQ1 873 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 M0QZQ0 153 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 TSC22D2O75157 780 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 CSF2P04141 144 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 ALOX5P09917 674 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 CDH4P55283 916 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 PHC1P78364 1004 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 TPRG1LQ5T0D9 272 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 APCDD1Q8J025 514 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 TMED5Q9Y3A6 229 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
TNFRSF21-201ENST00000296861 A0A1B0GVM2 712 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 UGT2B11O75310 529 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 INHBBP09529 407 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 HTR7P34969 479 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 NKX3-2P78367 333 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 AMER2Q8N7J2 671 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 WDR36Q8NI36 951 aaKnown RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 FEVQ99581 238 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 DOK1Q99704 481 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 RNF38Q9H0F5 515 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 GPN2Q9H9Y4 310 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 IL26Q9NPH9 171 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SLC22A1O15245 554 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 TAPBPO15533 448 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 EPOP01588 193 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 STATHP02808 62 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 PPP2R2BQ00005 443 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 OXA1LQ15070 435 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 TYSND1Q2T9J0 566 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SERINC5Q86VE9 423 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 ARMC8Q8IUR7 673 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SLC34A3Q8N130 599 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 STARD8Q92502 1023 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 FZD4Q9ULV1 537 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 A0A0G2JN53 185 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 FAM227AF5H4B4 570 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SLC10A3P09131 477 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 LAMP1P11279 417 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 ZNF24P17028 368 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 EPORP19235 508 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 PREPP48147 710 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 NFATC2Q13469 925 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 ARMCX4Q5H9R4 360 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 PLEKHG7Q6ZR37 379 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 OR9Q2Q8NGE9 314 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 OR8J3Q8NGG0 315 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 PKP4Q99569 1192 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 MGME1Q9BQP7 344 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 TIGARQ9NQ88 270 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
TNFRSF21-201ENST00000296861 MANSC4A6NHS7 340 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 CPNE6O95741 557 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 ANXA4P09525 319 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 KDELR2P33947 212 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 PTGER1P34995 402 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 HNF1BP35680 557 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 CLK3P49761 638 aaKnown RBP12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 CSTF3Q12996 717 aaKnown RBP12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 DSC3Q14574 896 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 ZNF404Q494X3 552 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 DESI1Q6ICB0 168 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 SLC16A12Q6ZSM3 486 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 USP51Q70EK9 711 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 TMPRSS11BQ86T26 416 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 MSRB3Q8IXL7 192 aa12.91□□□□□ -0.34
TNFRSF21-201ENST00000296861 C1orf52Q8N6N3 182 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms