RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 ART3Q13508 389 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 FASTKQ14296 549 aaKnown RBP15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 GBX1Q14549 363 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 PCID2Q5JVF3 399 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 CTSL3PQ5NE16 218 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 SP5Q6BEB4 398 aaPredicted RBP15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 RIPOR1Q6ZS17 1223 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 PRUNE1Q86TP1 453 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 MCEMP1Q8IX19 187 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 AMER3Q8N944 861 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 MAGEC3Q8TD91 643 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 ITLN2Q8WWU7 325 aaPredicted RBP15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 HAS2Q92819 552 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 DPH7Q9BTV6 452 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 ACAT2Q9BWD1 397 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 SYNPO2LQ9H987 977 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 RIC8BQ9NVN3 520 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 PLA2G3Q9NZ20 509 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 RUVBL1Q9Y265 456 aaKnown RBP15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 KLF2Q9Y5W3 355 aaPredicted RBP15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 DCHS2Q6V1P9 2916 aa15.2■□□□□ 0.02
TMEM41A-201ENST00000296254 PDZD2O15018 2839 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 CPAMD8Q8IZJ3 1885 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 IGKV1-8A0A0C4DH67 115 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 FFAR3O14843 346 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 GPR42O15529 346 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 VPS26AO75436 327 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 NDUFS3O75489 264 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 BMP10O95393 424 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 MATN4O95460 622 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 CELA2AP08217 269 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 ETS1P14921 441 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 CXCR2P25025 360 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 ATP5DP30049 168 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 EMP2P54851 167 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 CRADDP78560 199 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 FBXO42Q6P3S6 717 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 GFRALQ6UXV0 394 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 ARHGEF39Q8N4T4 335 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 CSNK1A1LQ8N752 337 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 BIRC8Q96P09 236 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 TGIF2Q9GZN2 237 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 RNF32Q9H0A6 362 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 EIF2B3Q9NR50 452 aaKnown RBP15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 PAK5Q9P286 719 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 ABI3Q9P2A4 366 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
TMEM41A-201ENST00000296254 LOC102723996A0A087X1L8 192 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 A0A0U1RQJ8 604 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 ARHGEF33A8MVX0 844 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 F10P00742 488 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 UQCRHP07919 91 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 ARNTP27540 789 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 GRNP28799 593 aaKnown RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 SLC26A3P40879 764 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 SESN2P58004 480 aaPredicted RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 HKDC1Q2TB90 917 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 GARNL3Q5VVW2 1013 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 HIBCHQ6NVY1 386 aaPredicted RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 PAQR7Q86WK9 346 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 CCDC89Q8N998 374 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 CCDC120Q96HB5 630 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 PHF12Q96QT6 1004 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 IL22Q9GZX6 179 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 RUBCNLQ9H714 662 aa15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 MKKSQ9NPJ1 570 aaPredicted RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 SUCOQ9UBS9 1254 aaKnown RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 TSR3Q9UJK0 312 aaKnown RBP15.18■□□□□ 0.02
TMEM41A-201ENST00000296254 MYO1CO00159 1063 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 UNC5CO95185 931 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 WDPCPO95876 746 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 HEXBP07686 556 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 POU3F2P20265 443 aaPredicted RBP15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 NMBRP28336 390 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 ZNF75DP51815 510 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 EFNA3P52797 238 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 AP2B1P63010 937 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 PCOLCEQ15113 449 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 RNF187Q5TA31 235 aaPredicted RBP15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 FAAH2Q6GMR7 532 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 ZNF425Q6IV72 752 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 SUSD1Q6UWL2 747 aa15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 BNC2Q6ZN30 1099 aaPredicted RBP15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 SLC13A5Q86YT5 568 aaPredicted RBP15.17■□□□□ 0.02
TMEM41A-201ENST00000296254 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms