RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PRKAA1Q13131 559 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 STX3Q13277 289 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 NR1D2Q14995 579 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 RBBP7Q16576 425 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 CATSPEREQ5SY80 951 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 KIAA1614Q5VZ46 1190 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 ARMC6Q6NXE6 501 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 FAM92BQ6ZTR7 304 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 FAM47EQ6ZV65 393 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 LRRC70Q7Z2Q7 622 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 TMPRSS9Q7Z410 1059 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 KLHDC8AQ8IYD2 350 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 LSMEM2Q8N112 164 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 TGM7Q96PF1 710 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 NUDT22Q9BRQ3 303 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 C1QTNF3Q9BXJ4 246 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 ABCG4Q9H172 646 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 TNFRSF12AQ9NP84 129 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 PCDHB11Q9Y5F2 797 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 HEATR5BQ9P2D3 2071 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 AGRPO00253 132 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 CAPN5O15484 640 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 RPLP0P05388 317 aaKnown RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 CDH1P12830 882 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 PNLIPP16233 465 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 EPB42P16452 691 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 ARL1P40616 181 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 CAPZBP47756 277 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 DUSP3P51452 185 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 EPHA4P54764 986 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 MEF2AQ02078 507 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 KIR2DS3Q14952 304 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 ARL13AQ5H913 290 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 SNAP47Q5SQN1 464 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 ICE2Q659A1 982 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 CGB2Q6NT52 195 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 FRMD7Q6ZUT3 714 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 PIP4P1Q86T03 277 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 DEFB124Q8NES8 71 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 OR2L3Q8NG85 312 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 OR6C4Q8NGE1 309 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 BAHD1Q8TBE0 780 aaPredicted RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 AGR3Q8TD06 166 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 SREK1Q8WXA9 508 aaKnown RBP14.59□□□□□ -0.07
CCDC140-201ENST00000295226 NAT6Q93015 286 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 TWSG1Q9GZX9 223 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 SLC6A20Q9NP91 592 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 EVA1BQ9NVM1 165 aa14.59□□□□□ -0.07
CCDC140-201ENST00000295226 IGKV1-8A0A0C4DH67 115 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 FAM221BA6H8Z2 402 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 H7BY64 318 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 FOXD2O60548 495 aaPredicted RBP14.58□□□□□ -0.07
CCDC140-201ENST00000295226 VARSP26640 1264 aaKnown RBP14.58□□□□□ -0.07
CCDC140-201ENST00000295226 SLC1A6P48664 564 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 SH3BP2P78314 561 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 ASPHQ12797 758 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 BNIP1Q12981 228 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 RCN2Q14257 317 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 ATG16L1Q676U5 607 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 SPESP1Q6UW49 350 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 LCTLQ6UWM7 567 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 TMPRSS11BQ86T26 416 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 SYVN1Q86TM6 617 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 C17orf64Q86WR6 236 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 CNDP1Q96KN2 507 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 PRAP1Q96NZ9 151 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 MAP3K3Q99759 626 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 LRRN3Q9H3W5 708 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 MRPS30Q9NP92 439 aaKnown RBP14.58□□□□□ -0.07
CCDC140-201ENST00000295226 SLCO1B3Q9NPD5 702 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 ZNF225Q9UK10 706 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 DYRK1BQ9Y463 629 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 KCNE2Q9Y6J6 123 aa14.58□□□□□ -0.07
CCDC140-201ENST00000295226 CFAP54Q96N23 3096 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 A8MU76 341 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 DUX1O43812 170 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 CCND1P24385 295 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 ACP1P24666 158 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 PIK3CGP48736 1102 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 ACADVLP49748 655 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 CCNG1P51959 295 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 ERVPABLB-1P60509 514 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 ABCE1P61221 599 aaKnown RBP14.58□□□□□ -0.08
CCDC140-201ENST00000295226 PRDX1Q06830 199 aaKnown RBP14.58□□□□□ -0.08
CCDC140-201ENST00000295226 CHIT1Q13231 466 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 KLHL35Q6PF15 583 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 MYLK4Q86YV6 388 aaPredicted RBP14.58□□□□□ -0.08
CCDC140-201ENST00000295226 SLC5A11Q8WWX8 675 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 HAUS8Q9BT25 410 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 TRIM55Q9BYV6 548 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 DRC3Q9H069 523 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 SPNS1Q9H2V7 528 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 MID1IP1Q9NPA3 183 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 TXLNGQ9NUQ3 528 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 POMT2Q9UKY4 750 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 RNF11Q9Y3C5 154 aa14.58□□□□□ -0.08
CCDC140-201ENST00000295226 COL5A1P20908 1838 aaPredicted RBP14.58□□□□□ -0.08
CCDC140-201ENST00000295226 CLGNO14967 610 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms