RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 KPNA3O00505 521 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 PSIP1O75475 530 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 AP2A2O94973 939 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 LAMP1P11279 417 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 PRPS1L1P21108 318 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 STT3AP46977 705 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 PIGFQ07326 219 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 LIPJQ5W064 366 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 R3HCC1LQ7Z5L2 792 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 EID3Q8N140 333 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ZCCHC7Q8N3Z6 543 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 GPR156Q8NFN8 814 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 DNAJB8Q8NHS0 232 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 GLYATL1Q969I3 302 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 LRRC3BQ96PB8 259 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 PKP4Q99569 1192 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 BARD1Q99728 777 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 FANCEQ9HB96 536 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 AASDHPPTQ9NRN7 309 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 SAGE1Q9NXZ1 904 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 HPRP00739 348 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 EPHA5P54756 1037 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 WNT3P56703 355 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 DMC1Q14565 340 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 DUOXA1Q1HG43 343 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 LIPIQ6XZB0 460 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 NEK10Q6ZWH5 1172 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 PARS2Q7L3T8 475 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 TECPR1Q7Z6L1 1165 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 GALNT5Q7Z7M9 940 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 C12orf40Q86WS4 652 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ZDHHC21Q8IVQ6 265 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 FAM9CQ8IZT9 166 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ZNF555Q8NEP9 628 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 OR52E4Q8NGH9 312 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 CLP1Q92989 425 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 RBM4BQ9BQ04 359 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 RBM4Q9BWF3 364 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 TIMMDC1Q9NPL8 285 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 TBC1D14Q9P2M4 693 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ABCG2Q9UNQ0 655 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 AP3M1Q9Y2T2 418 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 EVPLLA8MZ36 301 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 PLK4O00444 970 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 MITFO75030 526 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ATG13O75143 517 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 AGXTP21549 392 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 IMPA1P29218 277 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 CTNNB1P35222 781 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 IRS1P35568 1242 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ACSM2AQ08AH3 577 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 GTF2H3Q13889 308 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 CTU2Q2VPK5 515 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 ACSM2BQ68CK6 577 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 GAB3Q8WWW8 586 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 SH3KBP1Q96B97 665 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 HHIPQ96QV1 700 aa17.76■□□□□ 0.43
SHKBP1-201ENST00000291842 H3BMQ9 156 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 hCG_2039718K7EN88 272 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 SCN2BO60939 215 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 RECQL5O94762 991 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 IL1RL1Q01638 556 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 MTAPQ13126 283 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 TTC23Q5W5X9 447 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 DPPA4Q7L190 304 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 VTCN1Q7Z7D3 282 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 RASGRP3Q8IV61 690 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 C1orf52Q8N6N3 182 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 OR5K1Q8NHB7 308 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 COG8Q96MW5 612 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 SAMD11Q96NU1 681 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 CCM2Q9BSQ5 444 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 YTHDF1Q9BYJ9 559 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 C11orf49Q9H6J7 331 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 VPS4AQ9UN37 437 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 PLXNA2O75051 1894 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 K7ESM1 405 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 CEBPBP17676 345 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 DDX6P26196 483 aaKnown RBP eCLIP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 MMP12P39900 470 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 HTRA4P83105 476 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 CSTF3Q12996 717 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 HKDC1Q2TB90 917 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 ZNF773Q6PK81 442 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 KIAA0907Q7Z7F0 614 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 CHPFQ8IZ52 775 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 CCDC138Q96M89 665 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 MAGIXQ9H6Y5 334 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 SPATA6Q9NWH7 488 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 ATXN10Q9UBB4 475 aa17.75■□□□□ 0.43
SHKBP1-201ENST00000291842 SLC5A10A0PJK1 596 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 MYO1GB0I1T2 1018 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CCNDBP1O95273 360 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 KCNK5O95279 499 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CATP04040 527 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms