RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 AMZ2Q86W34 360 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NUFIP1Q9UHK0 495 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 INHBEP58166 350 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 C3P1Q6ZMU1 363 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 BOLLQ8N9W6 283 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 FRZBQ92765 325 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 KCTD15Q96SI1 283 aaPredicted RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 PRR5-ARHGAP8B1AHC4 643 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ABLIM1O14639 778 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 TOR1BO14657 336 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 SLC22A1O15245 554 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 POP4O95707 220 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 TSPAN15O95858 294 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 TNFP01375 233 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 GSTM3P21266 225 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 PRKAR1BP31321 381 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 SLC6A6P31641 620 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ALDH3B2P48448 385 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ARHGAP8P85298 464 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NCEH1Q6PIU2 408 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NEMP2A6NFY4 417 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 SCAF4O95104 1147 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NDST3O95803 873 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 MPSTP25325 297 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 THBS2P35442 1172 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 LRRC38Q5VT99 294 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 LGMNQ99538 433 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 L2HGDHQ9H9P8 463 aa12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMARCA5-201ENST00000283131 NPIPA2E9PIF3 369 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 NPIPA3F8WFD2 350 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CCND3P30281 292 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 HNF1BP35680 557 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CNTD1Q8N815 330 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 MYRFLQ96LU7 910 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ERVK-19Q9WJR5 959 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ZNF705FA8MVS1 300 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 LGALS2P05162 132 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ZNF705DP0CH99 300 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ZNF705BP0CI00 300 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 SLC9A3P48764 834 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 OAZ1P54368 228 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 IRF5Q13568 498 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 EIF2B1Q14232 305 aaKnown RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RBP7Q96R05 134 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CD180Q99467 661 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RLIMQ9NVW2 624 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 TAS2R1Q9NYW7 299 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ATP6V1G1O75348 118 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 FCER2P06734 321 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 KRBOX4Q5JUW0 171 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CPT1BQ92523 772 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 GPR21Q99679 349 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 EVLQ9UI08 416 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 MYO5CQ9NQX4 1742 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 EML1O00423 815 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CLDN5O00501 218 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 GRID2O43424 1007 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 MATN1P21941 496 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 ALDH3B1P43353 468 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 MALLQ13021 153 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RGMAQ96B86 450 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 TCEAL4Q96EI5 215 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 CDH22Q9UJ99 828 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 M0R233 179 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 SULT1B1O43704 296 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 IDH3GP51553 393 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 LRRC32Q14392 662 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 STRADAQ7RTN6 431 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 S100A7AQ86SG5 101 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 LINC00471Q8N535 108 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RRNAD1Q96FB5 475 aaKnown RBP12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 RNF19AQ9NV58 838 aa12.9□□□□□ -0.34
SMARCA5-201ENST00000283131 OR5H15A6NDH6 313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms