RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
SOD1-201ENST00000270142 DOCK10Q96BY6 2186 aa14.54□□□□□ -0.08
SOD1-201ENST00000270142 MYO1CO00159 1063 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 VPS26AO75436 327 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 PSIP1O75475 530 aaKnown RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 FGGP02679 453 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 F7P08709 466 aaPredicted RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 EDN3P14138 238 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 OGNP20774 298 aaKnown RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 EEF1A2Q05639 463 aaKnown RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 TSTA3Q13630 321 aaPredicted RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 KCNJ11Q14654 390 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 NAA25Q14CX7 972 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 HKDC1Q2TB90 917 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 CENPUQ71F23 418 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 PAQR7Q86WK9 346 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 CSNK1A1LQ8N752 337 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 PPFIBP2Q8ND30 876 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 FAR1Q8WVX9 515 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 SMPDL3AQ92484 453 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 PKP4Q99569 1192 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 SLC30A3Q99726 388 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 TRIM56Q9BRZ2 755 aaKnown RBP14.53□□□□□ -0.08
SOD1-201ENST00000270142 TAC3Q9UHF0 121 aa14.53□□□□□ -0.08
SOD1-201ENST00000270142 NSG1A0A0A6YYJ2 146 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 E5RI56 91 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 PFDN6O15212 129 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 AVILO75366 819 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 PKMP14618 531 aaKnown RBP14.52□□□□□ -0.09
SOD1-201ENST00000270142 RPA3P35244 121 aaPredicted RBP14.52□□□□□ -0.09
SOD1-201ENST00000270142 EMP3P54852 163 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 CDK16Q00536 496 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 DSG2Q14126 1118 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 TRIP13Q15645 432 aaPredicted RBP14.52□□□□□ -0.09
SOD1-201ENST00000270142 ICE2Q659A1 982 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 ZNF425Q6IV72 752 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 NDUFAF7Q7L592 441 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 CILP2Q8IUL8 1156 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 KBTBD2Q8IY47 623 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 BRIX1Q8TDN6 353 aaKnown RBP14.52□□□□□ -0.09
SOD1-201ENST00000270142 MAIP1Q8WWC4 291 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 PSMF1Q92530 271 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 OR2A5Q96R48 311 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 LMF1Q96S06 567 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 TCF12Q99081 682 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 YIPF2Q9BWQ6 316 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 PTGFRNQ9P2B2 879 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 TRPC4Q9UBN4 977 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 OSGIN2Q9Y236 505 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 UNC79Q9P2D8 2635 aa14.52□□□□□ -0.09
SOD1-201ENST00000270142 DOPEY1Q5JWR5 2465 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 IGHV1-45A0A0A0MS14 117 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 IDSB3KWA1 339 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 LRRTM2O43300 516 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 PHF2O75151 1096 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 USP1O94782 785 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 CATP04040 527 aaKnown RBP14.51□□□□□ -0.09
SOD1-201ENST00000270142 CELA2AP08217 269 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 PRR35P0CG20 571 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 SOX11P35716 441 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 SLC26A3P40879 764 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 VPS41P49754 854 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 CLCN7P51798 805 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 PNLIPRP1P54315 467 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 EMP2P54851 167 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 ARG2P78540 354 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 ARHGAP19Q14CB8 494 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 ANKRD22Q5VYY1 191 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 FAAH2Q6GMR7 532 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 RPUSD3Q6P087 351 aaKnown RBP14.51□□□□□ -0.09
SOD1-201ENST00000270142 FAM180AQ6UWF9 173 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 REXO1L1PQ8IX06 675 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 ARHGEF39Q8N4T4 335 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 AMER3Q8N944 861 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 MVB12AQ96EY5 273 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 SLX1AQ9BQ83 275 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 LZTFL1Q9NQ48 299 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 FAM114A2Q9NRY5 505 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 C14orf105Q9NVL8 296 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 PLA2G3Q9NZ20 509 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 PCYOX1Q9UHG3 505 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 CDC14AQ9UNH5 594 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 CROCCQ5TZA2 2017 aa14.51□□□□□ -0.09
SOD1-201ENST00000270142 MDC1Q14676 2089 aaKnown RBP14.5□□□□□ -0.09
SOD1-201ENST00000270142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.5□□□□□ -0.09
SOD1-201ENST00000270142 A0A1W2PQ72 361 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 GOLGA6L6A8MZA4 724 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 E7ENX8 843 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 P2RX6O15547 441 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 PRPF4O43172 522 aaKnown RBP eCLIP14.5□□□□□ -0.09
SOD1-201ENST00000270142 FOXS1O43638 330 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 CEP104O60308 925 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 CCNDBP1O95273 360 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 SLC16A8O95907 504 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 PAMP19021 973 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 EFNA3P52797 238 aa14.5□□□□□ -0.09
SOD1-201ENST00000270142 SNRPNP63162 240 aaKnown RBP14.5□□□□□ -0.09
SOD1-201ENST00000270142 TAP2Q03519 686 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms