RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SLC38A8A6NNN8 435 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 NT5C1B-RDH14C9J2C7 533 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 SF1Q15637 639 aaKnown RBP26.68■■□□□ 1.86
CBX4-201ENST00000269397 SKA2Q8WVK7 121 aaPredicted RBP26.68■■□□□ 1.86
CBX4-201ENST00000269397 PABPN1LA6NDY0 278 aaKnown RBP26.68■■□□□ 1.86
CBX4-201ENST00000269397 AGAP5A6NIR3 686 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 METTL15A6NJ78 407 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 ASGR1P07306 291 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 FADDQ13158 208 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 CLECL1Q8IZS7 167 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 QPCTLQ9NXS2 382 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 CRLS1Q9UJA2 301 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 PCDHGA6Q9Y5G7 932 aa26.68■■□□□ 1.86
CBX4-201ENST00000269397 DNTTP04053 509 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 TCEA1P23193 301 aaKnown RBP26.67■■□□□ 1.86
CBX4-201ENST00000269397 SLC19A1P41440 591 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 KIR3DL1P43629 444 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 RPIAP49247 311 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 PTOV1Q86YD1 416 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 SIGLEC11Q96RL6 698 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 SLX1AQ9BQ83 275 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 ZFYVE1Q9HBF4 777 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 CPNE5Q9HCH3 593 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 RFPL2O75678 378 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 NUDT7P0C024 238 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 CYP4F2P78329 520 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 TIGD6Q17RP2 521 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 UBE2UQ5VVX9 321 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 DESI1Q6ICB0 168 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 CHCHD4Q8N4Q1 142 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 DNAJB8Q8NHS0 232 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 SP140LQ9H930 580 aa26.67■■□□□ 1.86
CBX4-201ENST00000269397 A0A1B0GVM2 712 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 COCHO43405 550 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 FZD6O60353 706 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 CDC20Q12834 499 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 FOXD4Q12950 439 aaPredicted RBP26.66■■□□□ 1.86
CBX4-201ENST00000269397 CHRNA6Q15825 494 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 SERPINA11Q86U17 422 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 CAPSLQ8WWF8 208 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 CTRCQ99895 268 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 MMP27Q9H306 513 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 ALOX12P18054 663 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 TAF1CQ15572 869 aaPredicted RBP26.66■■□□□ 1.86
CBX4-201ENST00000269397 LRIT3Q3SXY7 679 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 ARMC12Q5T9G4 340 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 HEATR4Q86WZ0 1026 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 MYO19Q96H55 970 aa26.66■■□□□ 1.86
CBX4-201ENST00000269397 DSCR3O14972 297 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 NTRK1P04629 796 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 ITGALP20701 1170 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 ACRV1P26436 265 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 CRISP3P54108 245 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 TPRG1LQ5T0D9 272 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 SPATC1Q76KD6 591 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 KIAA1958Q8N8K9 716 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 PIH1D2Q8WWB5 315 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 IPCEF1Q8WWN9 437 aaPredicted RBP26.65■■□□□ 1.86
CBX4-201ENST00000269397 LINC01599Q8WXQ3 324 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 NELL1Q92832 810 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 TBC1D20Q96BZ9 403 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 TMEM184CQ9NVA4 438 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 RPS6KA6Q9UK32 745 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 SYN3O14994 580 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 STC2O76061 302 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 SEMG1P04279 462 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 ANXA5P08758 320 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 RPS3P23396 243 aaKnown RBP eCLIP26.65■■□□□ 1.867e-7■□□□□ 11
CBX4-201ENST00000269397 CTSKP43235 329 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 TTLL9Q3SXZ7 439 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 RTP2Q5QGT7 225 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 LACC1Q8IV20 430 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 UBTD2Q8WUN7 234 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 MAL2Q969L2 176 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 EFHD2Q96C19 240 aaPredicted RBP26.65■■□□□ 1.86
CBX4-201ENST00000269397 SLC29A3Q9BZD2 475 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 OR51E2Q9H255 320 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 SLC32A1Q9H598 525 aa26.65■■□□□ 1.86
CBX4-201ENST00000269397 A0A1W2PQ67 120 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 M0R129 80 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 SH3BGRLO75368 114 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 PRPS2P11908 318 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 GATMP50440 423 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 TESCQ96BS2 214 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 RUBCNLQ9H714 662 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 TMEM189-UBE2V1I3L0A0 370 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 ZNF24P17028 368 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 BPIP17213 487 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 TNFRSF1BP20333 461 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 GPR17Q13304 367 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 MRPL58Q14197 206 aaKnown RBP26.64■■□□□ 1.86
CBX4-201ENST00000269397 PRSS55Q6UWB4 352 aaPredicted RBP26.64■■□□□ 1.86
CBX4-201ENST00000269397 PARP16Q8N5Y8 322 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 TXNDC15Q96J42 360 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 CDADC1Q9BWV3 514 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 GPR83Q9NYM4 423 aa26.64■■□□□ 1.86
CBX4-201ENST00000269397 YY2O15391 372 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 EPN2O95208 641 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 ITPKAP23677 461 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 CASP9P55211 416 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms