RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RPS3P23396 243 aaKnown RBP eCLIP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 SP140Q13342 867 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 RPLP0P6Q8NHW5 317 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ANGPTL6Q8NI99 470 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 NPY6RQ99463 290 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ADAMTS3O15072 1205 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 GABARAPO95166 117 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 CLIC3O95833 236 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 DGKGP49619 791 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 GRIK5Q16478 980 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 OTOP3Q7RTS5 596 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 TMEM169Q96HH4 297 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 PEBP4Q96S96 227 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 SMAD5Q99717 465 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 PIGVQ9NUD9 493 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 HCN2Q9UL51 889 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 NME4O00746 187 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 TLL1O43897 1013 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 PRR5P85299 388 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 CSTF1Q05048 431 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 PAPD5Q8NDF8 572 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 TCEAL4Q96EI5 215 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 TLR4O00206 839 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 WNT10BO00744 389 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 PRAF2O60831 178 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 JUNP05412 331 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ZNF460Q14592 562 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 C10orf53Q8N6V4 93 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 RFT1Q96AA3 541 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 DDX60LQ5H9U9 1706 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ENDOD1O94919 500 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 GOT2P00505 430 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 ZNF81P51508 661 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 DAOAP59103 153 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 CD47Q08722 323 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 FUBP3Q96I24 572 aaKnown RBP eCLIP11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
DNMT3A-201ENST00000264709 EIF3FO00303 357 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 DYNC1LI2O43237 492 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SCN2BO60939 215 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 PRKACBP22694 351 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 PTBP1P26599 531 aaKnown RBP eCLIP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 CLCN4P51793 760 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 LILRA4P59901 499 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 GPAT3Q53EU6 434 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 CATSPERGQ6ZRH7 1159 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 ZNF655Q8N720 491 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 TCEAL3Q969E4 200 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 ZC3H10Q96K80 434 aaKnown RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 ACBD6Q9BR61 282 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 TIMM22Q9Y584 194 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MSI1O43347 362 aaKnown RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 JRKO75564 520 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 GNRH1P01148 92 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MT-ND2P03891 347 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 TCEA2Q15560 299 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MGLLQ99685 303 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 CCDC3Q9BQI4 270 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MRPL9Q9BYD2 267 aaKnown RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 NUMBLQ9Y6R0 609 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 GADD45GO95257 159 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 CCR10P46092 362 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 HSPA14Q0VDF9 509 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 DSG4Q86SJ6 1040 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 NEDD4LQ96PU5 975 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 AP3D1O14617 1153 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MT-CYBP00156 380 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 ANXA4P09525 319 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SLC13A2Q13183 592 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SMCO1Q147U7 214 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 ASPNQ9BXN1 380 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SMOC2Q9H3U7 446 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MGAT4BQ9UQ53 548 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SPIN1Q9Y657 262 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 OR4F21O95013 312 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 LRATO95237 230 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 BDNFP23560 247 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 MAPK3P27361 379 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 UBQLNLQ8IYU4 475 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SAMD14Q8IZD0 417 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 TBATAQ96M53 351 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 PCBD2Q9H0N5 130 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 RPIAP49247 311 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 SNTA1Q13424 505 aa11.38□□□□□ -0.59
DNMT3A-201ENST00000264709 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms