RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ABCB7O75027 752 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 INMTO95050 263 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 GRK6P43250 576 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
CD44-201ENST00000263398 DIO3P55073 304 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 ZNF829Q3KNS6 432 aaPredicted RBP10.48□□□□□ -0.73
CD44-201ENST00000263398 ZNF792Q3KQV3 632 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 MINDY4Q4G0A6 757 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 COLEC12Q5KU26 742 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 KLHL24Q6TFL4 600 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TAF8Q7Z7C8 310 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 CLIP4Q8N3C7 705 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TP53INP1Q96A56 240 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 RGMAQ96B86 450 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 FCRL3Q96P31 734 aaPredicted RBP10.48□□□□□ -0.73
CD44-201ENST00000263398 ZNF382Q96SR6 550 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 MAPKAP1Q9BPZ7 522 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TRIM2Q9C040 744 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 NLE1Q9NVX2 485 aaPredicted RBP10.48□□□□□ -0.73
CD44-201ENST00000263398 GIMAP2Q9UG22 337 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 HEBP2Q9Y5Z4 205 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TLR4O00206 839 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 B3GALT2O43825 422 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 CD2P06729 351 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 NOVP48745 357 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 SMCO1Q147U7 214 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 MOGQ16653 247 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TECRLQ5HYJ1 363 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 FAM129CQ86XR2 697 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 RHEBL1Q8TAI7 183 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 SLC22A18Q96BI1 424 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 NUS1Q96E22 293 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 CMTM7Q96FZ5 175 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 LRCH3Q96II8 777 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 CCM2Q9BSQ5 444 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 DKK3Q9UBP4 350 aa10.48□□□□□ -0.73
CD44-201ENST00000263398 INHAP05111 366 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 ADAM17P78536 824 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 ZNF630Q2M218 657 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 MYLK3Q32MK0 819 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 ARSIQ5FYB1 569 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 AGTRAPQ6RW13 159 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 THOC6Q86W42 341 aaKnown RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 ZNF420Q8TAQ5 688 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 NPLOC4Q8TAT6 608 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 GPR151Q8TDV0 419 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 EFHD2Q96C19 240 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 SLC2A13Q96QE2 648 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 GPER1Q99527 375 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 PKP4Q99569 1192 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 TTYH1Q9H313 450 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 PCDHGB7Q9Y5F8 929 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 A0A0G2JN53 185 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 A0A1W2PPW3 197 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 NOS1APO75052 506 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 GRB14Q14449 540 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 NANOGP8Q6NSW7 305 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 UBE2J2Q8N2K1 259 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 SMPDL3AQ92484 453 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 ZFP3Q96NJ6 502 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 DPEP2Q9H4A9 486 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 NANOGQ9H9S0 305 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 SLC28A3Q9HAS3 691 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 PFDN2Q9UHV9 154 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 RIMKLBQ9ULI2 386 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 MYH8P13535 1937 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 FAM72CH0Y354 149 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 DCLK1O15075 740 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 AKAP8O43823 692 aaKnown RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 RGS20O76081 388 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 PRMT2P55345 433 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 PITX1P78337 314 aaPredicted RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 AKIRIN2Q53H80 203 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 FAM72AQ5TYM5 149 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 FAM72DQ6L9T8 149 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 TUBA3EQ6PEY2 450 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 C14orf80Q86SX3 495 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 FAM72BQ86X60 149 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 HAVCR1Q96D42 359 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 IMP4Q96G21 291 aaKnown RBP10.47□□□□□ -0.73
CD44-201ENST00000263398 SCLYQ96I15 445 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 FBXL20Q96IG2 436 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 TXLNGYQ9BZA5 131 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 CD244Q9BZW8 370 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 TOR3AQ9H497 397 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 TM9SF3Q9HD45 589 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 MYH11P35749 1972 aa10.47□□□□□ -0.73
CD44-201ENST00000263398 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 J3QRK9 145 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 CLPXO76031 633 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 AGR2O95994 175 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 SERPINA3P01011 423 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 KLK1P06870 262 aa10.46□□□□□ -0.73
CD44-201ENST00000263398 HAPLN1P10915 354 aaPredicted RBP10.46□□□□□ -0.73
CD44-201ENST00000263398 PROZP22891 400 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms