RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 SLC22A14Q9Y267 594 aa18.78■□□□□ 0.6
SCARB1-201ENST00000261693 ZNF451Q9Y4E5 1061 aa18.78■□□□□ 0.6
SCARB1-201ENST00000261693 TET1Q8NFU7 2136 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 EFCAB9A8MZ26 197 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 BNIP3LO60238 219 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PRAMEF4O60810 478 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 COL6A1P12109 1028 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 AQP1P29972 269 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 CXCR4P61073 352 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 CARTPTQ16568 116 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PTCHD3Q3KNS1 767 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PRAMEF9Q5VWM5 478 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 NOXRED1Q6NXP6 359 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 NEK5Q6P3R8 708 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 RFLNAQ6ZTI6 216 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 TSPYL5Q86VY4 417 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-201ENST00000261693 SVOPQ8N4V2 548 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 KLF16Q9BXK1 252 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-201ENST00000261693 DSN1Q9H410 356 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 ABCB10Q9NRK6 738 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 SLCO3A1Q9UIG8 710 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 ZNF229Q9UJW7 825 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 SH3BGRLO75368 114 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 VIPP01282 170 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
SCARB1-201ENST00000261693 TGFBR2P37173 567 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 SPAM1P38567 509 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 AP1S1P61966 158 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PRKCZQ05513 592 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 SMARCB1Q12824 385 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 TAF12Q16514 161 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 CDKN3Q16667 212 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PRSS36Q5K4E3 855 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 GPR153Q6NV75 609 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 PTOV1Q86YD1 416 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 DNASE1L2Q92874 299 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 CMTM7Q96FZ5 175 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 ATG10Q9H0Y0 220 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 REEP1Q9H902 201 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 OR51B4Q9Y5P0 310 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 HSPE1-MOB4S4R3N1 261 aa18.77■□□□□ 0.6
SCARB1-201ENST00000261693 KCNE1BA0A087WTH5 132 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 A0A1W2PQ67 120 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 OR2A25A4D2G3 310 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 NUDT7P0C024 238 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 AMD1P17707 334 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 C21orf33P30042 268 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-201ENST00000261693 LIPAP38571 399 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
SCARB1-201ENST00000261693 NPRL3Q12980 569 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 DUOXA1Q1HG43 343 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 AGAP7PQ5VUJ5 663 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 PRSS48Q7RTY5 328 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 MCFD2Q8NI22 146 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 APH1BQ8WW43 257 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 SLC22A12Q96S37 553 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 BBS2Q9BXC9 721 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 KCTD5Q9NXV2 234 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 SCHIP1Q9P0W5 487 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-201ENST00000261693 ERVW-1Q9UQF0 538 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 NPIPB15A6NHN6 443 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-201ENST00000261693 EPN2O95208 641 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 GALTP07902 379 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 ALOX5P09917 674 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 CLK1P49759 484 aaKnown RBP18.76■□□□□ 0.59
SCARB1-201ENST00000261693 ACLYP53396 1101 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 MVKQ03426 396 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 CYP2U1Q7Z449 544 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 SYT12Q8IV01 421 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 VRK3Q8IV63 474 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 ENTHD1Q8IYW4 607 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 HTRA1Q92743 480 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 PROX1Q92786 737 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 SLC35B4Q969S0 331 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 KCNC2Q96PR1 638 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 PSD2Q9BQI7 771 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 RPS6KA6Q9UK32 745 aa18.76■□□□□ 0.59
SCARB1-201ENST00000261693 YY2O15391 372 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 CD40LGP29965 261 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 GRK3P35626 688 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 B4GALNT1Q00973 533 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 CAMK2GQ13555 558 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-201ENST00000261693 DDX39BQ13838 428 aaKnown RBP18.75■□□□□ 0.59
SCARB1-201ENST00000261693 UGT8Q16880 541 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 TPGS1Q6ZTW0 290 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 PCSK9Q8NBP7 692 aaKnown RBP18.75■□□□□ 0.59
SCARB1-201ENST00000261693 C2orf15Q8WU43 125 aaKnown RBP18.75■□□□□ 0.59
SCARB1-201ENST00000261693 UPF1Q92900 1129 aaKnown RBP eCLIP18.75■□□□□ 0.593e-8■■■■■ 40.7
SCARB1-201ENST00000261693 MAL2Q969L2 176 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 DCSTAMPQ9H295 470 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 OSGIN1Q9UJX0 560 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 RBMX2Q9Y388 322 aaKnown RBP18.75■□□□□ 0.59
SCARB1-201ENST00000261693 HTR3EA5X5Y0 456 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 MAGEB17A8MXT2 336 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 SEMG1P04279 462 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 COX7A2P14406 83 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 MAPK1P28482 360 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 SEPHS1P49903 392 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 ATP13A5Q4VNC0 1218 aa18.75■□□□□ 0.59
SCARB1-201ENST00000261693 MINDY2Q8NBR6 621 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms