RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PEX13Q92968 403 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 SEPT5Q99719 369 aaPredicted RBP15.46■□□□□ 0.06
LMNB1-201ENST00000261366 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.06
LMNB1-201ENST00000261366 AP5M1Q9H0R1 490 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 TM9SF3Q9HD45 589 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 TMEM184CQ9NVA4 438 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 FBXL12Q9NXK8 326 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 PCDHGA6Q9Y5G7 932 aa15.46■□□□□ 0.06
LMNB1-201ENST00000261366 ZFP37Q9Y6Q3 630 aaPredicted RBP15.46■□□□□ 0.06
LMNB1-201ENST00000261366 DOCK4Q8N1I0 1966 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 MICAL3Q7RTP6 2002 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 TRBV5-3A0A0A0MS03 114 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 NOTOA8MTQ0 251 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 EVPLLA8MZ36 301 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 ANKRD66B4E2M5 251 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-201ENST00000261366 SLC6A4P31645 630 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 ZNF157P51786 506 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-201ENST00000261366 DMC1Q14565 340 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CLECL1Q8IZS7 167 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CYP4Z2PQ8N1L4 340 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 IL17RDQ8NFM7 739 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CLPBQ9H078 707 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 PDE4DIPQ5VU43 2346 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 F5H5T6 163 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CCNDBP1O95273 360 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 PTTG1O95997 202 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 SLC10A3P09131 477 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CXCR2P25025 360 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 RRM2P31350 389 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 DDX39BQ13838 428 aaKnown RBP15.45■□□□□ 0.06
LMNB1-201ENST00000261366 ZMAT1Q5H9K5 638 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 SNAP47Q5SQN1 464 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 PNCKQ6P2M8 343 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 LINC00299Q6ZSB3 139 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 CALHM3Q86XJ0 350 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 PDLIM5Q96HC4 596 aaKnown RBP15.45■□□□□ 0.06
LMNB1-201ENST00000261366 TRIM39Q9HCM9 518 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 FAM8A1Q9UBU6 413 aa15.45■□□□□ 0.06
LMNB1-201ENST00000261366 IGLV3-10A0A075B6K4 115 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 MYADML2A6NDP7 307 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 HAS3O00219 553 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 CLIC1O00299 241 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 SLC28A1O00337 649 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 GFRA2O00451 464 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ERN1O75460 977 aaKnown RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 RPLP0P05388 317 aaKnown RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 OR1E2P47887 323 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 TGM4P49221 684 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 CPT1AP50416 773 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 MAD2L1Q13257 205 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 AGAP6Q5VW22 663 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ZNF280BQ86YH2 543 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 GLB1L3Q8NCI6 653 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 SPPL2AQ8TCT8 520 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 GGHQ92820 318 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 AGAP4Q96P64 663 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 DEPDC7Q96QD5 511 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 KCNH6Q9H252 994 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 PDFQ9HBH1 243 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 MOV10Q9HCE1 1003 aaKnown RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 RLIMQ9NVW2 624 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 DHRS7Q9Y394 339 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ESR1P03372 595 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 EPB42P16452 691 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 DEFA1P59665 94 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 DEFA3P59666 94 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 CXCR4P61073 352 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ABHD18Q0P651 414 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 FADDQ13158 208 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ZFP69Q49AA0 526 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 APIPQ96GX9 242 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 ADAM2Q99965 735 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 MGME1Q9BQP7 344 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 BBS2Q9BXC9 721 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 FAM126AQ9BYI3 521 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 OGDHLQ9ULD0 1010 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 SCML2Q9UQR0 700 aa15.44■□□□□ 0.06
LMNB1-201ENST00000261366 WBP11Q9Y2W2 641 aaKnown RBP15.44■□□□□ 0.06
LMNB1-201ENST00000261366 FPGTO14772 594 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 KIAA0513O60268 411 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 KDELR2P33947 212 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 TUBA1BP68363 451 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 TRIM60Q495X7 471 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 ATXN7L2Q5T6C5 722 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-201ENST00000261366 TUBA1AQ71U36 451 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 SERPINA9Q86WD7 417 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 ELMOD1Q8N336 334 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 EID2BQ96D98 161 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 OR5M11Q96RB7 305 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 FEVQ99581 238 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 TMEM246Q9BRR3 403 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 CD244Q9BZW8 370 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 ELOVL6Q9H5J4 265 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 PAQR5Q9NXK6 330 aaPredicted RBP15.43■□□□□ 0.06
LMNB1-201ENST00000261366 PADI3Q9ULW8 664 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
LMNB1-201ENST00000261366 MYO16Q9Y6X6 1858 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms