RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TMEM120BA0PK00 339 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 BIRC5O15392 142 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 RASSF9O75901 435 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 SIX3O95343 332 aaPredicted RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 EPB42P16452 691 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 GNAZP19086 355 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 EEF1DP29692 281 aaKnown RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 GABRA4P48169 554 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 PPM1FP49593 454 aaPredicted RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 YBX1P67809 324 aaKnown RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 HSD11B2P80365 405 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 TBCCQ15814 346 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 ZIC1Q15915 447 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 FBXO48Q5FWF7 155 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 THEMIS2Q5TEJ8 643 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 LIPMQ5VYY2 423 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 ATG9BQ674R7 924 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 FCRL6Q6DN72 434 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 SLCO4C1Q6ZQN7 724 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 OR6Y1Q8NGX8 325 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 ESAMQ96AP7 390 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 TMEM237Q96Q45 408 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 DPH7Q9BTV6 452 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 STRADBQ9C0K7 418 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 PITHD1Q9GZP4 211 aaPredicted RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
VPS25-201ENST00000253794 PILRAQ9UKJ1 303 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
VPS25-201ENST00000253794 CCDC187A0A096LP49 1063 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 LRRC14BA6NHZ5 514 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 CCNT2O60583 730 aaKnown RBP13.55□□□□□ -0.24
VPS25-201ENST00000253794 UGDHO60701 494 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 KATNA1O75449 491 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 WFS1O76024 890 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 BPGMP07738 259 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 PVRP15151 417 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 EZRP15311 586 aaKnown RBP13.55□□□□□ -0.24
VPS25-201ENST00000253794 MPSTP25325 297 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 SERPINB4P48594 390 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 CLDN6P56747 220 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 CSNK1G2P78368 415 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 ASPHQ12797 758 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
VPS25-201ENST00000253794 GTF2H2Q13888 395 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 UNC50Q53HI1 259 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 PHF19Q5T6S3 580 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 GTF2H2CQ6P1K8 395 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 NXPE4Q6UWF7 544 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 GOLGA7Q7Z5G4 137 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 C10orf107Q8IVU9 208 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 FAM20CQ8IXL6 584 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 DNAJC22Q8N4W6 341 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 BMPERQ8N8U9 685 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 RCBTB1Q8NDN9 531 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 ZNF285Q96NJ3 590 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 NTMT1Q9BV86 223 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 ZBTB26Q9HCK0 441 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 PDE7BQ9NP56 450 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 KCNK9Q9NPC2 374 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 KLHL3Q9UH77 587 aa13.55□□□□□ -0.24
VPS25-201ENST00000253794 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 KCNE1BA0A087WTH5 132 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 B4E171 279 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 E7EQ34 232 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 PRAMEF4O60810 478 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 TRIM13O60858 407 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 CDH1P12830 882 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 JUPP14923 745 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 KCNA4P22459 653 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 ALDH3A1P30838 453 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 CSTF2P33240 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS25-201ENST00000253794 TSPAN7P41732 249 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 CCR8P51685 355 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
VPS25-201ENST00000253794 REEP5Q00765 189 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 TARDBPQ13148 414 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS25-201ENST00000253794 SNAP47Q5SQN1 464 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 PRAMEF9Q5VWM5 478 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 IGF2-ASQ6U949 168 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 FRMD7Q6ZUT3 714 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 TEX9Q8N6V9 391 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 L3MBTL4Q8NA19 623 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 THAP11Q96EK4 314 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 PTCD3Q96EY7 689 aaKnown RBP13.54□□□□□ -0.24
VPS25-201ENST00000253794 SEC16BQ96JE7 1060 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 CMKLR1Q99788 373 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 EFCAB11Q9BUY7 163 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 GSTO2Q9H4Y5 243 aa13.54□□□□□ -0.24
VPS25-201ENST00000253794 NT5DC2Q9H857 520 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms